| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1773 |
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| Symbol | gatA |
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| ID | 7386756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1480439 |
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| End bp | 1481920 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651076 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_002549277 |
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| Protein GI | 222148320 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.329923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC TCACCAGCCT CACCATTGCC GAAGCCCGCG AAAAGCTGGT TTCCAAGGAT
ATCACCGCCG TCGAACTGAC CGATGCCTAT CTGGGCGCCA TCGAGGCTGC CAATGGCGCC
ATCAATGCCT ATGTGACGGT GACGCCGGAG ATTGCCCGCG ATATGGCCAA GGCCTCGGAT
GCGCGGCTGG CCACCGGCAA GGCTGGCGCG CTGGAGGGCA TTCCGCTTGG CGTCAAGGAC
CTGTTCGCCA CCCGCGACGT CCATACCCAG GCCTGCTCGA ACATTCTCGA CGGCTTCAAG
CCGAAATACG AATCGACCGT TACCCAGAAC CTCTGGAACG AGGGCGCGGT GATGTTGGGC
AAGCTGAACA TGGACGAATT CGCCATGGGT TCGTCCAACG AAAACTCCTT CTATGGTCCG
GTGGTCAATC CATGGCGTGC CACGGGATCT GAGGAAAAGC TGGTGCCGGG CGGCTCATCC
GGCGGTTCGG CGGCGGCTGT GGCTGCACGG CTTTGCGCGG GTGCCACTGC TTCCGATACC
GGCGGCTCCA TCCGCCAGCC GGCAGCTTTC ACCGGGACTG TTGGCATCAA GCCCACCTAT
GGCCGCTGCT CGCGTTGGGG TATTGTTGCT TATGCCTCGT CGCTCGATCA GGCCGGTCCA
ATTGCCCGCG ACGTGCGCGA TGCCGCCATC CTGCTCAAAT CCATGGCCAG CATAGACGAG
AAGGACACGA CCTCGGTCGA TCTGCTCGCT CCAAACTATG AGGCGGCCAT CGGCCAGTCC
GTCAAGGGCA TGAAGATCGG CATTCCCCGG GAGTACCGCG TCGATGGCAT GCCTGAGGAA
ATCGAGGCCC TCTGGCAGAA GGGCATGGCC TGGCTGAAGG AGGCCGGTGC CGAGATTGTC
GATATTTCCC TGCCGCATAC CAAATACGCC TTGCCAGCCT ATTACATTGT CGCCTCAGCC
GAAGCGTCAT CCAACCTCGC CCGCTATGAC GGTGTGCGCT ATGGCTTGCG TGTTGATGGC
AAGGATATTG CCGACATGTA TGAAAAGAGC CGCGCGGCGG GCTTCGGCAA AGAAGTGCAG
CGCCGCATCC TGATGGGCAC ATATGTGCTT TCGGCTGGCT ACTACGACGC CTATTACCTG
CGTGCCCAGA AAGTCCGCAC GCTGATCAAG CGCGATTTCG AACAGGTGTT TGCTGCTGGC
GTCGATGCGA TCCTGACGCC GATCACTCCG TCCTCGGCCT TCGCCATTGG CGATAAGGAT
CTGGCCGCCG ATCCGGTGAA AATGTATCTC AACGACATCT TCTCGGTAAC GCTGAACATG
GCGGGCCTGC CGGGCCTCTC GGTTCCTGCT GGTCTCGACG CCAAGGGTCT GCCGCTTGGC
CTGCAACTGA TCGGCAAGCC CTTCGAGGAA GAAACCCTTT TCAAAACCGC CCATGTCATC
GAACAGGCCG CCGGAAAGTT CACGCCCGCT CAGTGGTGGT AA
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| Protein sequence | MSELTSLTIA EAREKLVSKD ITAVELTDAY LGAIEAANGA INAYVTVTPE IARDMAKASD
ARLATGKAGA LEGIPLGVKD LFATRDVHTQ ACSNILDGFK PKYESTVTQN LWNEGAVMLG
KLNMDEFAMG SSNENSFYGP VVNPWRATGS EEKLVPGGSS GGSAAAVAAR LCAGATASDT
GGSIRQPAAF TGTVGIKPTY GRCSRWGIVA YASSLDQAGP IARDVRDAAI LLKSMASIDE
KDTTSVDLLA PNYEAAIGQS VKGMKIGIPR EYRVDGMPEE IEALWQKGMA WLKEAGAEIV
DISLPHTKYA LPAYYIVASA EASSNLARYD GVRYGLRVDG KDIADMYEKS RAAGFGKEVQ
RRILMGTYVL SAGYYDAYYL RAQKVRTLIK RDFEQVFAAG VDAILTPITP SSAFAIGDKD
LAADPVKMYL NDIFSVTLNM AGLPGLSVPA GLDAKGLPLG LQLIGKPFEE ETLFKTAHVI
EQAAGKFTPA QWW
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