| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1762 |
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| Symbol | pyrB |
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| ID | 7386749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1474589 |
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| End bp | 1475545 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651069 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_002549270 |
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| Protein GI | 222148313 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTTCT TTCCCCATCG CCATCTGATT GGCATCAAGG GCCTTACCGA AACCGATATT
ACCTATCTGC TCGATAAAGC TGACGAAGCG GTAAAAATCA GCCGCCAGCG TGAAAAAAAG
ACCTCCACCC TGCGCGGTCT GACCCAGATC AACCTTTTTT TCGAGGCGTC CACCCGCACC
CAGTCATCCT TCGAGCTGGC GGGCAAGCGG CTCGGTGCCG ATGTGATGAA CATGTCGGTC
GGTAATTCGT CGGTCAAGAA AGGCGAGACG CTGATCGATA CGGCGATGAC GCTGAACGCC
ATGCACCCGG ACGTGCTGGT GGTGCGCCAT GCCTCGGCCG GTGCCGCAGC GCTTCTGTCG
CAAAAGGTTG CCTGCGCGGT GATCAATGCC GGCGACGGCC AGCATGAACA TCCAACCCAG
GCGCTGCTCG ACGCGCTGAC AATCCGGCGC GCCAAGGGCA AGCTGTCGCG GATCATCGTT
GCAATCTGCG GCGACGTGCT GCATTCGCGC GTCGCCCGCT CCAATATTCT CCTGCTCAAC
GCCATGGGTG CGCGGGTCAG GGTCGTGGCC CCCGCCACGC TGCTGCCCTC TGGCATTGCC
GATATGAGTG TCGAAGTCTT CCACGATATG AAGGAAGGTC TCAAGGATGC TGATGTCGTG
ATGATGTTGC GCTTGCAGCG CGAGCGCATG GCAGGGTCGT TTGTCCCGTC GATCCGCGAA
TATTTCCACT TCTATGGGCT TGATGCCGAA AAGCTGAAAG CCGCCAAGGA AGACGCCCTG
GTCATGCATC CCGGCCCGAT GAACCGGGGG GTGGAAATCG CCTCCGATGT GGCCGATGGG
CCGCAAAGCG TCATCGAAAG CCAGGTCGAG ATGGGTGTCG CCGTGCGCAT GGCCGTGATG
GAATCGCTAC TGATCTCTGA CAATAACGGC CCGCGTAGCG AAGGAGTTGG CGCATGA
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| Protein sequence | MVFFPHRHLI GIKGLTETDI TYLLDKADEA VKISRQREKK TSTLRGLTQI NLFFEASTRT
QSSFELAGKR LGADVMNMSV GNSSVKKGET LIDTAMTLNA MHPDVLVVRH ASAGAAALLS
QKVACAVINA GDGQHEHPTQ ALLDALTIRR AKGKLSRIIV AICGDVLHSR VARSNILLLN
AMGARVRVVA PATLLPSGIA DMSVEVFHDM KEGLKDADVV MMLRLQRERM AGSFVPSIRE
YFHFYGLDAE KLKAAKEDAL VMHPGPMNRG VEIASDVADG PQSVIESQVE MGVAVRMAVM
ESLLISDNNG PRSEGVGA
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