| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1761 |
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| Symbol | pyrC |
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| ID | 7386748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1473300 |
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| End bp | 1474592 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651068 |
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| Product | dihydroorotase |
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| Protein accession | YP_002549269 |
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| Protein GI | 222148312 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC CGCTTGTCTT CACCAATGCC CGCATTATCG ACCCGTCGCG TTCGCTGGAT
GAGGTTGGCA GCATTATCGT CGGTGCCGAT GGCCGCATTC TGGCCTCCGG TGCCGATGCC
CGCAATCAGG GCGCGCCAGA GGGCGCCGAA ATCAGGGACT GCAAAGGTCT GGTCGCGGCA
CCGGGTCTGG TGGATGCGCA GGTATTTGTC GGCGAACCCG GTGGTGAGCA CCGCGAAACA
CTGGCCTCCG CCGGCAAGGC CGCAGCGGCT GGCGGCGTGA CCTCCTTCGT GATGATGCCG
GATACCGATC CTGTCATCGA TGACATCGCC CTGGTGGAAT TCATCAAGAA TGCGGCGCGG
GAAAAATCGC CGGTCAATAT CTACCCGGCA GCGGCCCTGA CCCGTCGGCT GCGCGGCGAG
GAAATGACCG AATTCGGCCT GTTGCAACAG GCGGGCGCCG TCTGCTTCAC CAATGGCCGC
CATGGACTGG ATGATACGCT GGTGCTGCGC CGGGCGATGA CCTATGCGCG TGAATTCGGC
GCGGTGATTT CGCTGGAACT GCACGAAAAA TATCTCGGCA ATGGCGTGAT GAACGAAGGC
CTGTTTGCCA GTTGGCTGGG CTTGTCCGGC GTGCCGAAGG AAGCCGAAAT CATTCCGCTG
GAACGCGACC TGCGTATCGC CGGGCTAACG CGGGCAAAAT ATCATGCCGC CAAGATTTCG
GTGCCCGGCT CGGTGGAGGC CATCAAACTT GCCCGCGCAC GCGGCGCCAA CGTCACCTGC
GGCATTTCCA TCAACAATCT GTCGCTGAAC GAAAACGATA TCGGTGAATA CCGGACGTTC
TTCAAACTGG CCCCGCCGCT GCGGGCCGAG GATGATCGGG TGGCGATGGT CGAGGCCTTG
GCAAGCGGCG ATATCGACAT CATCGTTTCA GCCCATGATC CGCAGGATGT CGATACCAAG
CGCCTGCCGT TCGGCGATGC TGCCGATGGC GCGGTTGGTC TGGAAACCTT GCTGGCAGCG
GCTCTCAGGC TGCATCATGC CGGTCAGGTG CCGCTGATGC GGCTGATCGA TGCGATGTCC
ACCCGGCCCG CTGCAATTTT CGGGCTGGAT GCCGGCACAT TGAAGCCGGG TGCAAAGGCC
GATATCGTAC TCATCGATCT GGACGAGCCA TGGTTGGTTG CCAAGGAGAC GCTGTTGTCG
CGCTCCAAGA ATACACCCTT TGAAGACGCC CGCTTCTCCG GCCGCGCTGT CGCCACCTAT
GTGGCGGGCC GTCCGGTGTT TTCTCTGTCT TGA
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| Protein sequence | MNKPLVFTNA RIIDPSRSLD EVGSIIVGAD GRILASGADA RNQGAPEGAE IRDCKGLVAA
PGLVDAQVFV GEPGGEHRET LASAGKAAAA GGVTSFVMMP DTDPVIDDIA LVEFIKNAAR
EKSPVNIYPA AALTRRLRGE EMTEFGLLQQ AGAVCFTNGR HGLDDTLVLR RAMTYAREFG
AVISLELHEK YLGNGVMNEG LFASWLGLSG VPKEAEIIPL ERDLRIAGLT RAKYHAAKIS
VPGSVEAIKL ARARGANVTC GISINNLSLN ENDIGEYRTF FKLAPPLRAE DDRVAMVEAL
ASGDIDIIVS AHDPQDVDTK RLPFGDAADG AVGLETLLAA ALRLHHAGQV PLMRLIDAMS
TRPAAIFGLD AGTLKPGAKA DIVLIDLDEP WLVAKETLLS RSKNTPFEDA RFSGRAVATY
VAGRPVFSLS
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