| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1759 |
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| Symbol | dprA |
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| ID | 7386746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1471495 |
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| End bp | 1472646 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651066 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_002549267 |
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| Protein GI | 222148310 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.582182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAG GCGGTTCGGG ACGCTCAGGT ATCGCCCTGA CGGAAAAACA ACGAACCGCC
TGGCTAAGGC TGATCCGCTC CGACAATGTC GGCCCGGCCA CTTTTCGCGA CCTGATCAAC
AATTTCGGCA CCGCCGAACG TGCCTTGGAC ATGCTGCCCG AACTGTCGCA GCGCGGCGGC
GCCACCCGTT CCATCCGCAT TGCGACAGTG GCTGAGGCCG AACGCGAGCT GGAATTTGCC
CGCAAATTCG GCGCGCGATT CGTCGGTATC GGCGAGCCGG ACTATCCCCC GGCGCTGCGC
CAGATCGACG CGGCGCCGCC GATTCTGGCG ATGAAAGGCT TGGGCAGTAC CGCCATCCGC
CCCTCCATCG GCATTGTCGG ATCGCGCAAT GCCTCAATCA GCGGCGTGAA AATGGCAGCA
CTGCTGGCAC GCGATTGCGG CACAACCGGC TACACCATCA CATCAGGTCT GGCGCGCGGT
ATCGATGCGG GCGCGCATCG GGCAAGCCTG GACACTGGCA CGATGGCCGC CCTGGCCGGT
GGGCTCGACC GGCCCTACCC GCCTGAGAAT GTCGATCTGC TGAAAGACAT CTGGGATGGC
AAGGGTGTGG CGATCAGCGA AATGCCATTT GGCTGGGAGC CTCGCGCCCG CGATTTTCCA
AGACGCAACC GCTTGATTGC AGGAACCTCA CTTGGGGTTG TGGTGATAGA AGCCGCCAGT
CGTTCCGGCT CACTGATTAC GGCGCGGCTG GCTGCCGATT TCGGACGGCT GGTGTTTGCC
GTGCCGGGCT CGCCGCTCGA TCCGCGCTGT CATGGTACCA ATGGACTGTT GAAAAACGGT
GCGACGATCA CCACCGAGGC CCGGGATATT CTCGAGGCGC TATCCCCGCT CAGCAGTATT
GACTTGTTTT CCCAGCCACA GGTGGAGGAG CCGGTCTATG AAGAAAGCGA GACCTTCAAC
CAGCCACCCG GCGAACAGGA TCGCAGCCGG ATCATCGATG CGTTGGGCAT AACGCCGGTC
GAGGTCGATG ATATCATTCG CCACACGCAA CTGCCGCCAT CCGCCGTCTA TCTGGTGATG
CTGGAACTGG ATATCGCCGG GCGCCTGCAC CGCCATCCCG GTGGCCTGGT TTCCATTGCA
CCGCTGGATT AA
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| Protein sequence | MSAGGSGRSG IALTEKQRTA WLRLIRSDNV GPATFRDLIN NFGTAERALD MLPELSQRGG
ATRSIRIATV AEAERELEFA RKFGARFVGI GEPDYPPALR QIDAAPPILA MKGLGSTAIR
PSIGIVGSRN ASISGVKMAA LLARDCGTTG YTITSGLARG IDAGAHRASL DTGTMAALAG
GLDRPYPPEN VDLLKDIWDG KGVAISEMPF GWEPRARDFP RRNRLIAGTS LGVVVIEAAS
RSGSLITARL AADFGRLVFA VPGSPLDPRC HGTNGLLKNG ATITTEARDI LEALSPLSSI
DLFSQPQVEE PVYEESETFN QPPGEQDRSR IIDALGITPV EVDDIIRHTQ LPPSAVYLVM
LELDIAGRLH RHPGGLVSIA PLD
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