Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1731 |
Symbol | |
ID | 7386726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1444652 |
End bp | 1446319 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651046 |
Product | metal dependent hydrolase |
Protein accession | YP_002549247 |
Protein GI | 222148290 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0816025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAGA CAGACGAACT GGTATTTCTG CCGCTGGGCG GCGTAGGTGA AATCGGCATG AACCTGGCGC TTTACGGCTT TGGCCCGCCG AAGAACCGGG AATGGATCAT GGTGGATTGC GGTGTGACCT TCCCTGGTCC CGATCTGCCT GGTGTGGATC TGGTGCTGCC GGACATCCGC TTCGTTCTCT CGCAGAAAAA CAGGCTCAAG GCGATCTTCA TCACCCACGC GCATGAAGAT CATTATGGTG GGCTAAACGA TATCTGGCCG GGCCTGAATG TGCCGGTCTA TGCCTCGGGT TTTACCGCTG GCATGTTGGA AGCCAAGCGG AATTATGAGG GAACCCGGGC TGAAATTCCG GTAACGCCCT TCAAGCCAGG CGACAAGGTC CATGTCGGCC CCTTTGTTGT CGAGGCTTCG GACGTCAACC ATTCCATTCC CGAGCCGATG TCGCTGATTA TTCGCACACC GCTTGGCAAT GTCATCCATA CTGGAGACTG GAAGATTGAC CATGCGCCGT CGCTTGGCCC GCTGACCGAT GAGGCGCGGT TCCGCGCTCT TGGTGACGAG GGCGTTCTGG CGGTGATGTG CGATAGCACC AACGCGATGC GGGAGGGCGT TTCGCCCTCC GAGCAGGAAG TCTCGGAAGG ATTGCGCAAG ATCATCCAAA CAGCAGAGGG GCGCGTGGCG ATCACCACGT TTTCCTCCAA TGTCGGACGT ATCCGCTCGA TTGCCAAGGC AGCCGAGGCA GCAGGCCGCG AAGTCCTGCT GTTGGGCAGC TCCCTGAAGC GGGTCGTCGG TGTGGCGCGC GATGTCGGGC TGATGGAAGG CGTGCAGCCC TTTATCGCCG AGGACGAATA TGGGTACATT CCCCGCGATA AGGTCGTGGT GATCCTGACA GGTAGCCAAG GTGAGTCGCG CGCGGCGCTT GCCAAGCTAT CGCGCGATGA AATGCGCAAC GTGGCGCTGA CCAAAGGCGA CACAGTTGTT TTTTCGTCTC GCGCTATTCC CGGCAATGAA AAGCCAATCA ACGATATCAA GAATGGCCTG ATCGAGCAGG GCGTCACCAT CGTTACCGAT AGCGACGCGC TGGTGCATGT CTCCGGTCAC CCACGCCGCA ACGAACTTTT GCAGATGTAC CAATGGACGC GCCCGCAAAT TCTTGTCCCT GTTCATGGCG AGGCGGCCCA TCTAACGGCG CAGCAGAAAC TGGCTCTGGA GGCGGGGATT GCGCAGGTGC CGAAAGTCCG CAATGGCGAC ATCCTGCGGT TGGCGCCTGG TCCTGCCGAA GTCATCGGTG AAGCGCCGTA TGGCAGAGTC TTCAAGGACG GCAAGCTGCT GGGCGATTTC GAGCAGATGG GCATTGGTGA GCGGCGTAAG CTGTCTTTTG CAGGCCATGT GTCTGTCAGC GTTCTCCTGG ACGAACGCTT TGAGTTCCGC GACGATCCGG AAGTGGTTGC CCATGGCCTG CCAGCGGAAG ATCTGGAAGG TGATGACATG GAGGACATTC TCTATGACGC CGTGCTGAGC GCCGTCGAGA GCATTCCGCG CACTCGGCGC AAGGATCTTG GCGCTTTGCG TGAAAGTATC CGTCGTGCTG TGCGCTCTAC GGCCAACGAG TGCTGGGGCA AGAAGCCGGT CGTTACGGTT TTTGTGACCA AGGTCTGA
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Protein sequence | MTKTDELVFL PLGGVGEIGM NLALYGFGPP KNREWIMVDC GVTFPGPDLP GVDLVLPDIR FVLSQKNRLK AIFITHAHED HYGGLNDIWP GLNVPVYASG FTAGMLEAKR NYEGTRAEIP VTPFKPGDKV HVGPFVVEAS DVNHSIPEPM SLIIRTPLGN VIHTGDWKID HAPSLGPLTD EARFRALGDE GVLAVMCDST NAMREGVSPS EQEVSEGLRK IIQTAEGRVA ITTFSSNVGR IRSIAKAAEA AGREVLLLGS SLKRVVGVAR DVGLMEGVQP FIAEDEYGYI PRDKVVVILT GSQGESRAAL AKLSRDEMRN VALTKGDTVV FSSRAIPGNE KPINDIKNGL IEQGVTIVTD SDALVHVSGH PRRNELLQMY QWTRPQILVP VHGEAAHLTA QQKLALEAGI AQVPKVRNGD ILRLAPGPAE VIGEAPYGRV FKDGKLLGDF EQMGIGERRK LSFAGHVSVS VLLDERFEFR DDPEVVAHGL PAEDLEGDDM EDILYDAVLS AVESIPRTRR KDLGALRESI RRAVRSTANE CWGKKPVVTV FVTKV
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