Gene Avi_1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1731 
Symbol 
ID7386726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1444652 
End bp1446319 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content59% 
IMG OID643651046 
Productmetal dependent hydrolase 
Protein accessionYP_002549247 
Protein GI222148290 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0816025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGA CAGACGAACT GGTATTTCTG CCGCTGGGCG GCGTAGGTGA AATCGGCATG 
AACCTGGCGC TTTACGGCTT TGGCCCGCCG AAGAACCGGG AATGGATCAT GGTGGATTGC
GGTGTGACCT TCCCTGGTCC CGATCTGCCT GGTGTGGATC TGGTGCTGCC GGACATCCGC
TTCGTTCTCT CGCAGAAAAA CAGGCTCAAG GCGATCTTCA TCACCCACGC GCATGAAGAT
CATTATGGTG GGCTAAACGA TATCTGGCCG GGCCTGAATG TGCCGGTCTA TGCCTCGGGT
TTTACCGCTG GCATGTTGGA AGCCAAGCGG AATTATGAGG GAACCCGGGC TGAAATTCCG
GTAACGCCCT TCAAGCCAGG CGACAAGGTC CATGTCGGCC CCTTTGTTGT CGAGGCTTCG
GACGTCAACC ATTCCATTCC CGAGCCGATG TCGCTGATTA TTCGCACACC GCTTGGCAAT
GTCATCCATA CTGGAGACTG GAAGATTGAC CATGCGCCGT CGCTTGGCCC GCTGACCGAT
GAGGCGCGGT TCCGCGCTCT TGGTGACGAG GGCGTTCTGG CGGTGATGTG CGATAGCACC
AACGCGATGC GGGAGGGCGT TTCGCCCTCC GAGCAGGAAG TCTCGGAAGG ATTGCGCAAG
ATCATCCAAA CAGCAGAGGG GCGCGTGGCG ATCACCACGT TTTCCTCCAA TGTCGGACGT
ATCCGCTCGA TTGCCAAGGC AGCCGAGGCA GCAGGCCGCG AAGTCCTGCT GTTGGGCAGC
TCCCTGAAGC GGGTCGTCGG TGTGGCGCGC GATGTCGGGC TGATGGAAGG CGTGCAGCCC
TTTATCGCCG AGGACGAATA TGGGTACATT CCCCGCGATA AGGTCGTGGT GATCCTGACA
GGTAGCCAAG GTGAGTCGCG CGCGGCGCTT GCCAAGCTAT CGCGCGATGA AATGCGCAAC
GTGGCGCTGA CCAAAGGCGA CACAGTTGTT TTTTCGTCTC GCGCTATTCC CGGCAATGAA
AAGCCAATCA ACGATATCAA GAATGGCCTG ATCGAGCAGG GCGTCACCAT CGTTACCGAT
AGCGACGCGC TGGTGCATGT CTCCGGTCAC CCACGCCGCA ACGAACTTTT GCAGATGTAC
CAATGGACGC GCCCGCAAAT TCTTGTCCCT GTTCATGGCG AGGCGGCCCA TCTAACGGCG
CAGCAGAAAC TGGCTCTGGA GGCGGGGATT GCGCAGGTGC CGAAAGTCCG CAATGGCGAC
ATCCTGCGGT TGGCGCCTGG TCCTGCCGAA GTCATCGGTG AAGCGCCGTA TGGCAGAGTC
TTCAAGGACG GCAAGCTGCT GGGCGATTTC GAGCAGATGG GCATTGGTGA GCGGCGTAAG
CTGTCTTTTG CAGGCCATGT GTCTGTCAGC GTTCTCCTGG ACGAACGCTT TGAGTTCCGC
GACGATCCGG AAGTGGTTGC CCATGGCCTG CCAGCGGAAG ATCTGGAAGG TGATGACATG
GAGGACATTC TCTATGACGC CGTGCTGAGC GCCGTCGAGA GCATTCCGCG CACTCGGCGC
AAGGATCTTG GCGCTTTGCG TGAAAGTATC CGTCGTGCTG TGCGCTCTAC GGCCAACGAG
TGCTGGGGCA AGAAGCCGGT CGTTACGGTT TTTGTGACCA AGGTCTGA
 
Protein sequence
MTKTDELVFL PLGGVGEIGM NLALYGFGPP KNREWIMVDC GVTFPGPDLP GVDLVLPDIR 
FVLSQKNRLK AIFITHAHED HYGGLNDIWP GLNVPVYASG FTAGMLEAKR NYEGTRAEIP
VTPFKPGDKV HVGPFVVEAS DVNHSIPEPM SLIIRTPLGN VIHTGDWKID HAPSLGPLTD
EARFRALGDE GVLAVMCDST NAMREGVSPS EQEVSEGLRK IIQTAEGRVA ITTFSSNVGR
IRSIAKAAEA AGREVLLLGS SLKRVVGVAR DVGLMEGVQP FIAEDEYGYI PRDKVVVILT
GSQGESRAAL AKLSRDEMRN VALTKGDTVV FSSRAIPGNE KPINDIKNGL IEQGVTIVTD
SDALVHVSGH PRRNELLQMY QWTRPQILVP VHGEAAHLTA QQKLALEAGI AQVPKVRNGD
ILRLAPGPAE VIGEAPYGRV FKDGKLLGDF EQMGIGERRK LSFAGHVSVS VLLDERFEFR
DDPEVVAHGL PAEDLEGDDM EDILYDAVLS AVESIPRTRR KDLGALRESI RRAVRSTANE
CWGKKPVVTV FVTKV