| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1727 |
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| Symbol | nuoL |
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| ID | 7386722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1438911 |
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| End bp | 1440902 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651042 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_002549243 |
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| Protein GI | 222148286 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTGT ATAAGACAAT CGTCTTTCTT CCGCTGCTTG GCGCGCTCAT CGCCGGCCTG
TTCGGTCGCC AGATCGGCGC CAAGGCATCG GAATTCATCA CGACAGGGTT CATGGTGCTG
ACTGCGGCCC TGTCTTGGTA CGTGTTTATC TCGGTGGGCT TCGGTCATTC TGAGCTGATC
AAGGTTCCAG TTTTACGCTG GATTCAGGTC GGCGGCATCG ACGTTGAATG GGCGCTGAGG
ATCGACACGC TTACAGCGGT CATGCTGGTC GTCGTCAACA GCGTCTCGAC GCTGGTGCAT
CTCTATTCCA TCGGCTACAT GCATCACGAT CCGCATCGCC CGCGCTTCTT CAGCTATCTG
TCGCTGTTTA CCTTCGCAAT GTTGATGCTG GTCACGTCAG ACAATCTCCT GCAGATGTTC
TTCGGCTGGG AAGGCGTCGG TCTGGCATCC TATTTGCTGA TCGGCTTCTG GTTCAAGAAA
CCGTCGGCAA CGGCTGCGGC CATGAAAGCC TTCATCGTCA ACCGTGTCGG CGACTTCGGC
TTTATTCTCG GCATCGCTAC GCTGTTCGTT CTGTTCGGAT CGATCAATTT CGAGACGATC
TTCGCTTCGG CCCAGACATA TCTGCCAGCC GAAGGCGCAC CTGCCGGTGA CGCTGTCATC
AATCTGTTCG GTATGCATCT TGACAAGGGC CATGCGGTCA CCGCAGCCTG CCTGCTGCTG
TTCATGGGGG CCATGGGCAA GTCGGCGCAG TTCCTGCTGC ATACCTGGCT GCCGGACGCG
ATGGAGGGGC CGACACCGGT TTCGGCACTG ATCCACGCGG CAACCATGGT TACCGCCGGG
GTCTTCCTCG TTGCCCGCAT GTCTCCGGTC TTTGAACTGT CGCCGGACGC CCTAACGGTC
GTCACCATCG TCGGTGCGAT CACGGCCTTC TTCGCGGCCA CCGTTGGTCT CGTGCAGAAC
GACATCAAGC GGGTGATTGC CTATTCGACC TGCTCGCAGC TCGGCTACAT GTTCGTGGCG
CTCGGCGTCG GCGCCTATGG CGCTGCCATT TTCCACCTGT TCACGCATGC GTTCTTCAAG
GCCTTGTTGT TCCTTGGTGC CGGTTCGGTC ATTCATGCGG TGGATGGCGA ACAGGACATG
CGTCACATGG GTGGGCTGCG CAAGCATATC CCCGTGACCT TCTGGGCGAT GACCATCGGT
AATCTGGCGC TGACAGGTGT TGGTATTCCG GGAACGATGA TCGGTACGGC GGGCTTCTTC
TCCAAGGATG CGATTATCGA ATCCTCGTTT GCCGCCGGTA CAGGCGTTTC AACCTTTGCC
TTCGTGCTTT TGGTTATTGC GGCCCTGTTC ACCAGCTTCT ATTCCTGGCG CCTGGCGTTC
ATGACCTTCT TCGGCAAGCC GCGCGCCTCG CATGAAGTCA TGCATCATGT GCATGAATCG
CCTCAAGTCA TGCTCGTTCC GCTTTACCTG TTGACGGCGG GTGCCTTGTT TGCTGGCTTC
ATCTTCCATG ACTATTTCTT CGGCGAAGCC TATGCCGAGT TCTGGAAGGG CGCGCTGTTT
ACCGGTGCGC ATAATGAAGT GCTCCAAGAG GTCCATCACG TTCCGACCTG GGTGAAGCTC
AGCCCGTTTG TTGCCATGCT CCTCGGCTTG GTCACCGCGT GGTACATGTA CATCAAGTCG
CCGGAAACGC CGAAGAAACT GGCACAAAGC CAGTGGCTTC TCTACCAATT CCTGCTCAAC
AAGTGGTATT TCGACGAGCT TTATGACTTC CTTTTCGTAC GGTCCGCCAA GGCGCTTGGC
CGGTTCCTGT GGAAGAAGGG CGATGTTGCC ACGATCGATG CCTATGGCCC GAATGGCGTT
GCTGCCGGGG TCGCAGGTCT GACGCAGCGG GTTGTCCGGC TGCAATCCGG CTATCTCTAC
CACTATGCGT TCGCGATGCT GCTCGGGATT GCAGCGCTTA TTACCTGGAT GATGCTCGGG
AGTTCGATCT GA
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| Protein sequence | MLLYKTIVFL PLLGALIAGL FGRQIGAKAS EFITTGFMVL TAALSWYVFI SVGFGHSELI
KVPVLRWIQV GGIDVEWALR IDTLTAVMLV VVNSVSTLVH LYSIGYMHHD PHRPRFFSYL
SLFTFAMLML VTSDNLLQMF FGWEGVGLAS YLLIGFWFKK PSATAAAMKA FIVNRVGDFG
FILGIATLFV LFGSINFETI FASAQTYLPA EGAPAGDAVI NLFGMHLDKG HAVTAACLLL
FMGAMGKSAQ FLLHTWLPDA MEGPTPVSAL IHAATMVTAG VFLVARMSPV FELSPDALTV
VTIVGAITAF FAATVGLVQN DIKRVIAYST CSQLGYMFVA LGVGAYGAAI FHLFTHAFFK
ALLFLGAGSV IHAVDGEQDM RHMGGLRKHI PVTFWAMTIG NLALTGVGIP GTMIGTAGFF
SKDAIIESSF AAGTGVSTFA FVLLVIAALF TSFYSWRLAF MTFFGKPRAS HEVMHHVHES
PQVMLVPLYL LTAGALFAGF IFHDYFFGEA YAEFWKGALF TGAHNEVLQE VHHVPTWVKL
SPFVAMLLGL VTAWYMYIKS PETPKKLAQS QWLLYQFLLN KWYFDELYDF LFVRSAKALG
RFLWKKGDVA TIDAYGPNGV AAGVAGLTQR VVRLQSGYLY HYAFAMLLGI AALITWMMLG
SSI
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