Gene Avi_1724 details

Gene Information

• Locus tag: Avi_1724
• Symbol: nuoJ
• ID: 7386720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1437948
• End bp: 1438562
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643651040
• Product: NADH dehydrogenase subunit J
• Protein accession: YP_002549241
• Protein GI: 222148284
• COG category: [C] Energy production and conversion
• COG ID: [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.752552
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCTTC AGGCAATCTT TTTCTACCTT TTCGCCTTTG TCGCGGTTGC GTCGGCGTTC 
ATGGTTATTT CGTCACGCAA TCCGGTTCAT TCGGTTTTGT TCCTCATCCT CACCTTCGTC 
AACGCGGCTG GTCTGTTCAT GCTGACGGGT GCCGAGTTCC TGGCGATGAT CCTGCTGGTC 
GTCTATGTCG GCGCGGTTGC AGTGCTCTTC CTGTTCGTGG TGATGATGCT GGACATCGAC 
TTCACGGAAT TGAGGGCAGG GGCTTCGAAA TATGGTCCCT TGGCGGCCTT GATCGGCGCC 
ATCGTTGCAG CTGAACTGAT CTTCGTCATC GGCGGCTCGG CGATTTCCCC AGCTGCAAAG 
CAGGCGATCA CCATGCCGAT TCCGGCACTG GCGGACCGTC AGAACACGGC CGCGCTCGGT 
GATGTGCTCT ATACCAATTA TGTCTTCTTC TTCCAAATCG CCGGCCTCGT GCTGCTGGTG 
GCCATGATCG GCGCTATCGT GCTGACGCTG CGTCACCGCC AGCACATCAA GCGGCAGAAT 
ATTGCACACC AGGTTGCACG TGGACCGGCG ACTGCCATCA AGGTGGTCAA GGTCAAGCCC 
GGCCAGGGCA TCTGA 

 

Protein sequence

MGLQAIFFYL FAFVAVASAF MVISSRNPVH SVLFLILTFV NAAGLFMLTG AEFLAMILLV 
VYVGAVAVLF LFVVMMLDID FTELRAGASK YGPLAALIGA IVAAELIFVI GGSAISPAAK 
QAITMPIPAL ADRQNTAALG DVLYTNYVFF FQIAGLVLLV AMIGAIVLTL RHRQHIKRQN 
IAHQVARGPA TAIKVVKVKP GQGI