Gene Avi_1719 details

Gene Information

• Locus tag: Avi_1719
• ID: 7386716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1433109
• End bp: 1433840
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643651036
• Product: hypothetical protein
• Protein accession: YP_002549237
• Protein GI: 222148280
• COG category: [S] Function unknown
• COG ID: [COG3743] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGAGG CTTCGAAACG GACGGGAACG GATGCATCGG CAAAGCCGGC TGACGCTAGC 
CGCGGCGCTG AGATGGCCGG ATCGTCGCTG CATGCTCTTA TGGCCAACCC GATGGCTGCC 
TTTGCGGCTG CCACGGTGCT TGGTTTCGGT TTTGCCACCC AGATGACCGG TGTGATGCTC 
GGTTCCATGC AAACAATGAT GGACAAGCCT ACCCGTCGGA CGAAGGACGA TGTGCCGGAA 
GATAAAGCTG ATCATCAGGT TGCTGCCGCA TCCGTTTCAG AGGTCAATTT GAAGCCTGAA 
ACGCAGCTGC AGCCAGTCGA TGCTCCGGTT TCGGATGCAG TGGTTCCGCC CAAAGTATCA 
CCCGCACGCC GTCCAGTCGC AAAAACCAAG AGCAAGCCGC AGGCTGCCAA GCCGATAAAA 
AGCCCGGCAG TGCGTTCGGC CAAAAAACCG ACAGTCGCGC CTGTGACGCC GGTAGAGGAG 
CCCGAAGTGA AGGCAGCGCC TGTTGCCGTC AAGCCCGCCC GGCGGCGCGG CAAGAAGGTT 
GATCTTAAGG CAATCGGCGG TGTCGGGCCG AAGGTTCAGG AAATGCTCAG TAAACTGGGT 
GTTCATGGCC TTGATGATAT CGCCACCTGG ACCCCCGAAG ATGCGGCACG GATTGATGCG 
GAGCTTGGTC TCGACGGTCG CATCCTGCGT GATGACTGGA TCGGACAGGC CCGCAAGCTG 
ACCGGTGCTT GA 

 

Protein sequence

MVEASKRTGT DASAKPADAS RGAEMAGSSL HALMANPMAA FAAATVLGFG FATQMTGVML 
GSMQTMMDKP TRRTKDDVPE DKADHQVAAA SVSEVNLKPE TQLQPVDAPV SDAVVPPKVS 
PARRPVAKTK SKPQAAKPIK SPAVRSAKKP TVAPVTPVEE PEVKAAPVAV KPARRRGKKV 
DLKAIGGVGP KVQEMLSKLG VHGLDDIATW TPEDAARIDA ELGLDGRILR DDWIGQARKL 
TGA