Gene Avi_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1704 
SymbolfadD 
ID7386706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1421742 
End bp1423340 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content58% 
IMG OID643651023 
Productlong-chain-fatty-acid-CoA-ligase 
Protein accessionYP_002549227 
Protein GI222148270 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.49493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTACT ATGGTGGCGC AGGTTTGCGC GAAACTTCGG CGTTTGCTGG CATGGTCGCG 
GAGGATCCGG TCCGGTTCCG CGCCAATAGC GGTCCAGATC GGCCAGCCGT CATGGAACTG
GCAACCGGGC AATCATTGAC ATTTTCTGAA TTCGATACGC TGATCGGGCG ATGCGCCGCC
GCTCTTGACG ATGTGATCGC AAGGGCAGGG ACGGGGCAGG ACAGCCCAGC CCGTATTGCC
TATCTCGGGC GCAATTCCAT TGCCCAATTC GCGGTTTGTT TTGCCTGCCA GCGGATCGGT
GCGATCTTCG TGCCATTGAA CTGGCGCTTG AGCGCCCGAG AAATTTCGCT GATTCTTGCC
GACTGCGAAC CGACGCTATT GCTGTACGAT GCGGAATTTG CCGAAGCCGG TAGTAGCTTC
GAGGTCGAAA GCCTTGATGT GACCGGTAAG GGAGGCTTTC TGGATAAGGC CTCGGTTTTG
GAGCCAATCG CACCTCGCTA TTCATCTGCC GACCGTACAT GCGTGATTCT CTACACATCC
GGGACGACAG GCGTGCCAAA GGGCGTGCTG CTTAACGCCC GCAATCTGTT TTTCTCCGCC
TTGAATTTTG CTTTCGTCGG TGAGGTGACG CCGGATTCGG TCGTGCTTTG CGACTTGCCG
TTTTTCCATA CGATCGGGTT GGTGGCCCTG GCGCGCACCG CAATGGTGAT GGGCGCCCGA
CTGGTCATTT CTGACCGCTT CATTGCTGAA CGCACGATTG CCACCATGGC GGACACCCAA
ATCGGCGTCA GCCATTATTG TGGTGTGCCG CAAATGGCCA GTACGTTGCG GAACTCGCCG
AATTGGAACC CGGCTGCTTT GCAGGGTTTG AAGGCGATCT TTCTGGGTGG CGCGCCTTTG
CCACCGGTGC TGATTGAGCG TTTTCTCGAT GACGGCATTG CGCTGGTCAA TGGCTATGGG
ATGAGCGAAA CCGGCACGGC CTATCATATG CCGCTCGACC GCCAACTCAT CGCCCGTCAT
CCGGGTAGTA TCGGTTTTGC GGCCCCCTTG CTTGAAACGC GGGTTGTTGA TTTCGATGGT
GCCGATGTCA CCGATGGCGG GATCGGTGAA ATCTGGCTAC GAGGACCAAG CGTCACAGAG
GGCTATTGGA ACCGTCCGGA CCTTACCGAG GCTGCCTTCA CCGATGGTTG GTTTCGCAGC
GGCGATATGG CGCGGGTCCA GGACGGTGTC GTCTATCTCG CTGATCGCCT GAAGGACATG
TATATCAGCG GCGGTGAAAA CGTCTATCCG GCTGAGGTTG AAGCGGCTAT TGCCGCCCAT
CCCGGCGTTG CCGATGTCGC AGTCATGGGC CTTGCCCATG CCGAATGGGG CGAGGTCGGC
CTGGCACTGG TCGTCGCTGG CAACGACGGC CTACGTGATC ACGATATCCT ACGCCATTGC
GCTGATCGGC TTGCCAGCTT CAAACGGCCC AAACACGTGG TGTTTGTGGA TGCCATTCCC
CGTTCGGCTT CTGGCAAGGT GCAGAAGCAC ATTTTGCGCC AATCCTATAC TCACCTTTCA
TCCAGTTCGA CACCGGCGTC CGGACAGCCC GGCGCATAA
 
Protein sequence
MSYYGGAGLR ETSAFAGMVA EDPVRFRANS GPDRPAVMEL ATGQSLTFSE FDTLIGRCAA 
ALDDVIARAG TGQDSPARIA YLGRNSIAQF AVCFACQRIG AIFVPLNWRL SAREISLILA
DCEPTLLLYD AEFAEAGSSF EVESLDVTGK GGFLDKASVL EPIAPRYSSA DRTCVILYTS
GTTGVPKGVL LNARNLFFSA LNFAFVGEVT PDSVVLCDLP FFHTIGLVAL ARTAMVMGAR
LVISDRFIAE RTIATMADTQ IGVSHYCGVP QMASTLRNSP NWNPAALQGL KAIFLGGAPL
PPVLIERFLD DGIALVNGYG MSETGTAYHM PLDRQLIARH PGSIGFAAPL LETRVVDFDG
ADVTDGGIGE IWLRGPSVTE GYWNRPDLTE AAFTDGWFRS GDMARVQDGV VYLADRLKDM
YISGGENVYP AEVEAAIAAH PGVADVAVMG LAHAEWGEVG LALVVAGNDG LRDHDILRHC
ADRLASFKRP KHVVFVDAIP RSASGKVQKH ILRQSYTHLS SSSTPASGQP GA