| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1702 |
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| Symbol | |
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| ID | 7386704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1419666 |
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| End bp | 1421003 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651021 |
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| Product | Na+/melibiose symporter and related transporter protein |
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| Protein accession | YP_002549225 |
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| Protein GI | 222148268 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.574642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGC TGTCGAACCT GACTTTGCTA TTTTACGCGC TTCCGGCCCT GCCTTTGGCG
GCCATTGCTT TGCCGCTCTA TATCATCGTT CCGTCCGTTT ATGCCGGGCG GTTCGGTATT
GCTCTGTCGG CCATTGGGGC CGCTTTGCTG GCCATTCGCT GTCTGGATGC GATAACCGAT
CCGCTGATAG GTTGGCTCGC GGACCGGATT CCCGGTCGGT ATGGTCGTCG CCGTCTGTTC
TTTCTATTGT CTTTGCCGCT GACGGCGGTC TCCGCTTTCA TGCTGTTCAA CCCACCGGAA
GGGGCAGGGC TTGCGCATCT GGTGGTTTGG GGCTGTCTTC TGTCGATCGG CAGTACCTGG
ACAAGCCTGC CTTATACCGC CTGGGGTGCC GAACTCGAGA CCTCCTACGA TGGCCGGGTC
AGGCTTTCGG CTTGGCGTGA GGGTACGACG CTACTCGGCA CGCTGCTCGC CATCTCGCTG
CCTTTCCTGG GGCAGGCATC CACGGCAGGC GCCCAGCCGG ACCTGAATGC GATTGCTGTT
ATGGTGGCGG TGCTCTTGCC AATCTTTGGT GCCATTGCGG TATGGCGCGT GGCGGAACCG
GTGGATTTTT CGAAAACCCG GCTTTCTCTG AAGGCAGGAG CGGGCTTTCT GCTGGCCAAT
AGCGCCTTTC TGCGGCTGGC GATGGCCTTC TTGATGAATT CTCTGGCCAA TGCCATCCCC
GCTTCGCTGT TTCTTTATTT CGTCGCGGCG CGGTTGGAGG CGCGTGAGCT TCAAGGGCCT
TTGCTGTTTG CTTATTTCTT ATCGGCGGTC GCCGGCGTGC CACTTGCGGT TTTCGTGGCG
CGGCGGCTGG GCAAGCACAG GGCCTGGTGC TGGGCCATGC TGCTCAGCTG CGCGATCTTT
GCCTTGGCCG GCCTGCTGGG GCCGGGAGAC GCCTGGCTGT TCCTCGGCAT CTGCGTGGTG
ACGGGCGTCT TGCTCGGCTT TGATCTGGCG CTACCGCCAG CCATTCAGGC CGATGTGATC
GATCAGGACA CACTGGCGTC GGGAGAACAG CGATCCGGGC TTTATTTCGC CGCCTGGAGT
TTCGTCACCA AGCTGGCATT GGCGCTCTCT TCCGGCATTG TCTTTCCGCT ACTGGCTTTG
GCAGGCTTCC AGCCGGAAGG CGGCGCCCAA AGCGGGCAGG CGCTTTCGGT CTTGTCGGCG
CTTTATGCTT TCTTGCCGAT CCTGTTCAAG CTTTTCGCCA TCGCTCTTAT GTGGCGGTTT
TCCATCGACA GCACGCACCA GCACGCCACT CGACAGAAAA TCGAGCAGCG CCAGAGGGAA
ATATCAAACC CATCATGA
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| Protein sequence | MKPLSNLTLL FYALPALPLA AIALPLYIIV PSVYAGRFGI ALSAIGAALL AIRCLDAITD
PLIGWLADRI PGRYGRRRLF FLLSLPLTAV SAFMLFNPPE GAGLAHLVVW GCLLSIGSTW
TSLPYTAWGA ELETSYDGRV RLSAWREGTT LLGTLLAISL PFLGQASTAG AQPDLNAIAV
MVAVLLPIFG AIAVWRVAEP VDFSKTRLSL KAGAGFLLAN SAFLRLAMAF LMNSLANAIP
ASLFLYFVAA RLEARELQGP LLFAYFLSAV AGVPLAVFVA RRLGKHRAWC WAMLLSCAIF
ALAGLLGPGD AWLFLGICVV TGVLLGFDLA LPPAIQADVI DQDTLASGEQ RSGLYFAAWS
FVTKLALALS SGIVFPLLAL AGFQPEGGAQ SGQALSVLSA LYAFLPILFK LFAIALMWRF
SIDSTHQHAT RQKIEQRQRE ISNPS
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