| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1698 |
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| Symbol | clpX |
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| ID | 7386701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1414402 |
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| End bp | 1415679 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651018 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_002549222 |
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| Protein GI | 222148265 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.556565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG TCAGCGGAAG CAACGGCGGT GACTCGAAGA ATACCCTGTA TTGTTCGTTC
TGCGGCAAGA GCCAGCACGA GGTCCGGAAA CTGATTGCCG GCCCGACGGT TTTCATCTGC
GATGAATGCG TCGAACTCTG CATGGATATC ATCCGCGAGG AAAACAAGAG TTCGATGGTC
AAGTCGCGCG ATGGCGTGCC GACACCGCAG GACATCATCA AGATCCTCGA CGAATATGTG
ATCGGCCAGA GACAGGCCAA GAAGATCCTG TCCGTTGCTG TCCACAATCA TTACAAGCGC
CTCTCGCATG CCTCCAAGGG TGGCGATGTG GAGTTGGCGA AGTCAAACAT CCTGCTGGTC
GGGCCAACCG GTTGCGGCAA GACCTATCTT GCCCAGACTC TGGCGCGCAT CATCGATGTG
CCCTTCACCA TGGCGGATGC GACAACGCTG ACAGAAGCCG GCTATGTCGG TGAAGACGTT
GAAAACATCA TCCTGAAGCT GCTGCAATCG GCCGATTACA ATGTCGAGCG CGCCCAGCGC
GGCATCGTCT ATATCGACGA AGTCGACAAG ATCAGCCGCA AGTCCGACAA CCCGTCGATT
ACCCGCGACG TGTCTGGCGA AGGCGTACAG CAGGCGCTGC TGAAGATCAT GGAAGGCACT
GTGGCTTCGG TTCCTCCCCA GGGCGGTCGC AAGCATCCGC AGCAGGAATT CCTGCAGGTG
GATACGACCA ATATCCTGTT CATCTGCGGT GGTGCTTTTG CCGGTCTGGA CAAGATCATC
TCGGCTCGTG GCGAAAAGAC CTCGATCGGC TTCGGTGCGA CGGTTGTGTC GCCGGAAGAT
CGTCGCGTCG GCGAAGTGCT GCGCGAACTG GAACCGGAAG ATCTGGTCAA GTTCGGCCTG
ATCCCGGAAT TCATCGGTCG TCTGCCGGTT CTGGCGACGC TGGAAGACCT GGACGAGGAC
GCGCTGATCC AGATCCTGTC CGAGCCAAAG AATGCCCTGG TCAAGCAGTA TCAGCGCCTG
TTCGAAATGG AGGACGTTGA ATTGTCCTTC CACGAGGACG CGCTACGCGA AATCGCCCGC
AAGGCGATTA CCCGCAAGAC CGGCGCTCGC GGCCTGCGCT CGATCATGGA AAAGATCCTG
CTCGACACGA TGTTCGAACT GCCTGAGCTT GAAGGCGTGC GCGAAGTGGT GATTTCCGAT
GAAGTGGTGC GCGGTGCCGC CCGTCCGCTC TACATCTATG CGGATCGCCA GGAAGAAAAG
GCCAACGCTT CGGCGTGA
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| Protein sequence | MSKVSGSNGG DSKNTLYCSF CGKSQHEVRK LIAGPTVFIC DECVELCMDI IREENKSSMV
KSRDGVPTPQ DIIKILDEYV IGQRQAKKIL SVAVHNHYKR LSHASKGGDV ELAKSNILLV
GPTGCGKTYL AQTLARIIDV PFTMADATTL TEAGYVGEDV ENIILKLLQS ADYNVERAQR
GIVYIDEVDK ISRKSDNPSI TRDVSGEGVQ QALLKIMEGT VASVPPQGGR KHPQQEFLQV
DTTNILFICG GAFAGLDKII SARGEKTSIG FGATVVSPED RRVGEVLREL EPEDLVKFGL
IPEFIGRLPV LATLEDLDED ALIQILSEPK NALVKQYQRL FEMEDVELSF HEDALREIAR
KAITRKTGAR GLRSIMEKIL LDTMFELPEL EGVREVVISD EVVRGAARPL YIYADRQEEK
ANASA
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