| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1696 |
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| Symbol | clpP |
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| ID | 7386700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1413481 |
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| End bp | 1414113 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651017 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_002549221 |
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| Protein GI | 222148264 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.82204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAATC CAGTTGATAC CGCCATGGCT CTGGTGCCTA TGGTTGTGGA GCAGACCAAT
CGCGGCGAAC GGTCCTACGA CATCTACTCG CGTCTGTTGA AGGAGCGTAT CATTTTCCTG
ACCGGACCGG TCGAGGATCA TATGGCGTCG CTTGTCTGCG CCCAGTTGCT GTTTCTGGAA
GCGGAAAATC CGAAGAAGGA AATCGCGATC TACATCAATT CTCCCGGCGG TGTCGTGACT
GCTGGCATGG CGATCTACGA TACGATGCAG TTCATCCGTC CGGCCGTCTC GACGCTGTGC
GTCGGCCAGG CCGCCTCGAT GGGGTCGCTG CTTCTGGCGG CCGGCGAAAA GGGCATGCGC
TTTGCGACCC CCAACGCCCG CATCATGGTG CATCAGCCGT CCGGCGGTTT CCAGGGTCAG
GCCTCCGACA TCGAACGTCA TGCCCGCGAC ATCATCAAGA TGAAGCGTCG CTTGAACGAG
GTTTATGTCA AGCACACTGG CCGCACGCTG GAAGAAGTCG AGCACACGCT TGACCGCGAC
CACTTCATGG AATCCACGGA AGCCAAGGAT TGGGGTCTGA TCGACAAGAT CCTGACGACG
CGCTCCGAAA TCGAAGGGGT AACGCCTTCT TGA
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| Protein sequence | MRNPVDTAMA LVPMVVEQTN RGERSYDIYS RLLKERIIFL TGPVEDHMAS LVCAQLLFLE
AENPKKEIAI YINSPGGVVT AGMAIYDTMQ FIRPAVSTLC VGQAASMGSL LLAAGEKGMR
FATPNARIMV HQPSGGFQGQ ASDIERHARD IIKMKRRLNE VYVKHTGRTL EEVEHTLDRD
HFMESTEAKD WGLIDKILTT RSEIEGVTPS
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