Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1687 |
Symbol | |
ID | 7386694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1406746 |
End bp | 1407198 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651011 |
Product | hypothetical protein |
Protein accession | YP_002549215 |
Protein GI | 222148258 |
COG category | [R] General function prediction only |
COG ID | [COG1832] Predicted CoA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.863027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCATG ACGTTTATGA GAGCGATTAT CTCAGGACCA TTCTGGAAAC GGTCAAGATC ATTGCTCTGA CCGGGGCTTC GCCCAATCCG GCGCGGCCAA GCCATGGGGT CATGCATTTT CTGCTGAACC ATGGCTACCG CGTTATTCCG GTCAATCCGG GGCAGGCGGG AAAGGACATT CTGAGGCAGA CTGTTTTTGC GTCGCTTGGG GACATTCCCG AGCCCGTCGA TATGATCGAT GTGTTCCGCG CCTCCGAATA TCTGCCCGCA GTGGTGGATG AAGCCTTGGG ACTCAAGCAT TTGCCGAAGG TGATCTGGGC TCAGCTTGGC GTGCGCGACG ACCAAGCCGC CGCCCGCGCC GAAGCAGCCG GGATCAAGGT GGTGATGAAC CGCTGCCCGG CCATCGAATA TCCGAGAATT TTTCAAGGGA CACTGGAGCC GGACAGGCAT TAG
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Protein sequence | MQHDVYESDY LRTILETVKI IALTGASPNP ARPSHGVMHF LLNHGYRVIP VNPGQAGKDI LRQTVFASLG DIPEPVDMID VFRASEYLPA VVDEALGLKH LPKVIWAQLG VRDDQAAARA EAAGIKVVMN RCPAIEYPRI FQGTLEPDRH
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