Gene Avi_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1687 
Symbol 
ID7386694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1406746 
End bp1407198 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content58% 
IMG OID643651011 
Producthypothetical protein 
Protein accessionYP_002549215 
Protein GI222148258 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.863027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCATG ACGTTTATGA GAGCGATTAT CTCAGGACCA TTCTGGAAAC GGTCAAGATC 
ATTGCTCTGA CCGGGGCTTC GCCCAATCCG GCGCGGCCAA GCCATGGGGT CATGCATTTT
CTGCTGAACC ATGGCTACCG CGTTATTCCG GTCAATCCGG GGCAGGCGGG AAAGGACATT
CTGAGGCAGA CTGTTTTTGC GTCGCTTGGG GACATTCCCG AGCCCGTCGA TATGATCGAT
GTGTTCCGCG CCTCCGAATA TCTGCCCGCA GTGGTGGATG AAGCCTTGGG ACTCAAGCAT
TTGCCGAAGG TGATCTGGGC TCAGCTTGGC GTGCGCGACG ACCAAGCCGC CGCCCGCGCC
GAAGCAGCCG GGATCAAGGT GGTGATGAAC CGCTGCCCGG CCATCGAATA TCCGAGAATT
TTTCAAGGGA CACTGGAGCC GGACAGGCAT TAG
 
Protein sequence
MQHDVYESDY LRTILETVKI IALTGASPNP ARPSHGVMHF LLNHGYRVIP VNPGQAGKDI 
LRQTVFASLG DIPEPVDMID VFRASEYLPA VVDEALGLKH LPKVIWAQLG VRDDQAAARA
EAAGIKVVMN RCPAIEYPRI FQGTLEPDRH