| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1664 |
|---|
| Symbol | |
|---|
| ID | 7386676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 1390396 |
|---|
| End bp | 1391532 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643650993 |
|---|
| Product | glycosyl transferase |
|---|
| Protein accession | YP_002549197 |
|---|
| Protein GI | 222148240 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATG AAAATGGGCT GCGGATCATT CATTGTTTCC GCTCGCCAAT TGGCGGCATT
TTCCGGCATG TGCGCGATCT GGTCGAGCAT CATGACGCGC TTGGCCATTC CGTCGGCATC
ATCTGCGACA GCAGCACGGG TGGCGCCCAT GAGGACGCCC TGTTCGCAGA ATTGCAGCCC
CGCCTGAAAC TCGGCCTTAT TCGCCAGCCG ATCCGGCGTG CCATTGGATT TGACGATATC
AGCGCGGTGC GCTCCTGCTA CCGGCATATA AAGAGCCTGA AACCCGATAT ACTGCATGGT
CACGGCGCCA AAGGCGGCGC GCTCGCCCGC ATCATTGGCA CGGCCCTTCG CATGCAGGGA
TCAAAGGTTG TCCGCCTCTA TTCACCGCAT GGCGGTAGCC TGCATTATCG CCGCAACAGG
CCAGTTGGCA GACTGATCTT TGCACTGGAA AAGCTGCTGG AACGCCAGAC CGAAGCCATC
GCCTTTGTCT GCGGCTTCGA GCAATGGTCC TACGGGCAAA AGGTGGGAAA GCCGAGTTGC
GACTCCCGAT TGATTTTGAA CGGGATCAGC GAAAGCGAGT TTCGACCTGT GCCAATCCGT
GACGCAGCCG TGGATTTCGT TTTCATCGGC ATGTTGCGGG ATCTGAAAGG CCCTGACGTC
TTCATCAACG CCGTGCTGGA GGCTGAACGG CTGCTGGGTC GCCCGCTGAC CGCCGCAGTC
ATCGGCGACG GCCCGGACCG TGACAGATAC GAGCAGCAGA TTCACCAGCG CGGCCTTGGG
CTTCGCATGC AATTGCTGCC TGCCATGCGG GTCTCGGAGG CCTTTACCTT CAGCAATATT
GTCGTCGTCC CCTCCAGGGC CGAATCCATG CCCTATATCG TGCTGGAGGC GATCGCCGCC
GGAAAATCGG TGATTGCCAG CGCCGTTGGC GGCATTCCGG AGGCGCTCGG CAAAACCAGC
GCCGCACTTG TTGCGCCCGA CAATGTCGAG GAACTGGCCG CGACCATGGT GCAGGCCCTG
ACCCAGCCGG ACTGGAAACA GGTTGTCATG CCGGACCCAA CGCTCTTCCA TGCGCGATTT
TCAGCCTCTG CCATGGCCGC GCAAATGCTG GCGCTCTACC GCGATCATTC GGTTTGA
|
|---|
| Protein sequence | MPDENGLRII HCFRSPIGGI FRHVRDLVEH HDALGHSVGI ICDSSTGGAH EDALFAELQP
RLKLGLIRQP IRRAIGFDDI SAVRSCYRHI KSLKPDILHG HGAKGGALAR IIGTALRMQG
SKVVRLYSPH GGSLHYRRNR PVGRLIFALE KLLERQTEAI AFVCGFEQWS YGQKVGKPSC
DSRLILNGIS ESEFRPVPIR DAAVDFVFIG MLRDLKGPDV FINAVLEAER LLGRPLTAAV
IGDGPDRDRY EQQIHQRGLG LRMQLLPAMR VSEAFTFSNI VVVPSRAESM PYIVLEAIAA
GKSVIASAVG GIPEALGKTS AALVAPDNVE ELAATMVQAL TQPDWKQVVM PDPTLFHARF
SASAMAAQML ALYRDHSV
|
|---|
| |