| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1639 |
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| Symbol | istA |
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| ID | 7387427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1369794 |
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| End bp | 1371311 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650976 |
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| Product | IS21 family transposase |
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| Protein accession | YP_002549181 |
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| Protein GI | 222148224 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTTT TAAACATCAT CCGTCGGATG GCGCTGCGTG AGAAGCAGTC GATCCGCGAG
ATCAGCCGGC GTACTGGGCT GTCACGTAAC ACGATCGCAA AGTATTTGAA CGCTGGCACG
ATCGAGCCGA CGTTTACGGT ACCGGAGCGA CCGAGCAAGC TTGATCCTTT CGCCGACAAA
CTTTCTGGCT GGCTGAAGAC CGAGGCAGGG CGGTCGCGCA AGCAGCGCCG AACGCTGAAG
CAGCTTCATG CCGATCTTGT GGCTCTCGGC TTTACCGGCT CTTATGGCCG GGTCGCCGCG
TTCGCCCGTG AGTGGCAGGC TGAGCAGCAG ACGGCGGGCC GCGGCATATT CGTACCGTTA
TCATTCCGCC CAGGTGAAGC ATTCCAATTC GATTGGAGTG AAGATTATGC CGTGATCGCT
GGCGAGCGTG TGAAGCTTCA GGTCGCACAT ATCAAGCTAT CGCACAGTCG GGCCTTTCTG
GTCAGGGCTT ACCTGCTGCA AACGCACGAG ATGCTCTTCG ATGCTCACTG GCACGGCTTC
CGGGTCTTCG GCGGTGTGCC TGCGCGAGGG ATTTATGACA ATATGCGCAC AGCCGTTGAT
CGGGTCGGCC GTGGCAAGGA GCGGCAGGTC AATATCCGTT TCCTGGCGAT GACGAACCAC
TACGTCTTTG CGCCCGAATT CTGCAATCCA GCGGCCGGTT GGGAAAAGGG TCAGGTCGAG
AAGAACGTCC AGGATGCCCG ACCACGCTTG TGGCAACAGA TGCCAGACTT TCCAAATCTG
ATGGCGTTGA ATGACTGGCT GGAGCAACAT TGCCAGGAGC TGTGGCGGGA GACGCTGCAT
GGCACCTTGT CAGGCACGAT CGCGGATGTT TGGGCCGATG AGCGGGCAGC ATTGATGGCG
CTCCCTGCCA TGTTTGACGG CTTCGTCGAG CAGAGCAAGC GCGTCTCACC AACATGCCTG
ATCACCTTCG AGCGTAATCG TTACAGCGTG CCAGCATCAT TTGCGAACCG GCCCGTCAGC
CTGCGGATAT ACCCAGACCG ACTGGTTGTT GCGGCCGAGG GAAACATTCT GTGTGAACAC
GCGCGGATTA TTGAGCGCAG CCACAAGCTA CCGCGAACGA TCTACGACTG GCGGCATTAC
CTTGCCGTCA TCCAACGCAA GCCCGGAGCC CTACGCAATG GCGCACCGTT TTTAGAATTA
CCGTCTGCCT TTCGACAACT ACAGGAGCAG ATGCTTCGTC GTCCTGGCGG TGATCGTGAG
ATGGCCGATA TCCTTGCCCT TGTCCTTCAT CACGACGAAC AGGCCGTACT CCGTGCTGTG
GAGTTGGCTC TGGATGCGGG CGTGGCGACC AAGACGCATG TAATGAACCT GCTGCATCGG
TTGATTGACG GCAAGACCAC CGATGGTCCC GATATCGACA CGCCACAGGC GCTAACCTTG
TTGCGTGAAC CCAAGGCCAA TGTCGAACGC TATGACGGTT TACGTGTCCG CATCGTGGGA
GGTCGCCATG CGTCATGA
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| Protein sequence | MGLLNIIRRM ALREKQSIRE ISRRTGLSRN TIAKYLNAGT IEPTFTVPER PSKLDPFADK
LSGWLKTEAG RSRKQRRTLK QLHADLVALG FTGSYGRVAA FAREWQAEQQ TAGRGIFVPL
SFRPGEAFQF DWSEDYAVIA GERVKLQVAH IKLSHSRAFL VRAYLLQTHE MLFDAHWHGF
RVFGGVPARG IYDNMRTAVD RVGRGKERQV NIRFLAMTNH YVFAPEFCNP AAGWEKGQVE
KNVQDARPRL WQQMPDFPNL MALNDWLEQH CQELWRETLH GTLSGTIADV WADERAALMA
LPAMFDGFVE QSKRVSPTCL ITFERNRYSV PASFANRPVS LRIYPDRLVV AAEGNILCEH
ARIIERSHKL PRTIYDWRHY LAVIQRKPGA LRNGAPFLEL PSAFRQLQEQ MLRRPGGDRE
MADILALVLH HDEQAVLRAV ELALDAGVAT KTHVMNLLHR LIDGKTTDGP DIDTPQALTL
LREPKANVER YDGLRVRIVG GRHAS
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