Gene Avi_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1636 
SymbolexsG 
ID7387424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1367090 
End bp1368118 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content56% 
IMG OID643650973 
Producttwo component sensor kinase 
Protein accessionYP_002549178 
Protein GI222148221 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.264656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTG ATGACGTCAC CGAAGCGCGT CTTGCCAGCG CGGAGGCTGA GCGGAGCTGG 
ATTCTTGCGC AGAATATTGT CGATACGGTC CGTGATCCAC AGCTGGTGCT GGAGCACGAC
ATGAGCGTTG TGTTTGCCAG CCGTTCTTTC CTGAAACTTT TCGGCGTTCA ATCCACGGAG
GTTGTCGGCC AGCAGTTGAA AACGCTGGGG GACGGCCAGT GGAATGTGGC GGCGCTCAAC
GATCTTCTGG AACGCGTTCT GCCACGCGAC GAGCATGTCG ATGGCTTGCT GCTGGAGGAC
GACTTTCCCG GTCTGGGCCG GCGTGTGTTC AAGATCAATG CCAGGAAAAT ATTTCGGCCC
GGCAATCATG TCACTCGGAT GCTCGTCGTG TTCGAGGACG CAACGGAGGC CGTGCTGCTC
GACAGGCACA GGGATATATT GGCAGCGGAA CTGGCCCATC GTATCAAGAA CAGCCTGCAA
ATCATCTCCT CTTTTGTGTC CCATGAGATT CGCCGCGCCG CAGAGCCTTG TGCCGAAGGA
TATAAGGCGA TGCAGGCGCG GATCAGGGCC GTCGCCGAAC TGTATGACGT CATTGCTCAA
TCCAGCGCGT TTGGTCCAGT CAATATGGAA ACCTATCTGA GAGGCATCAA CAACACGATC
CGCAAGAGCC TTCTAAGCCC GAATTCAAAC ATCACGATCA GCACGAAGAC CGAGCCGTTA
AGCATTCTCC CTGATCATGC CGTATCGATC GGCTTGATCG TCAATGAACT TGCCACCAAT
GCCGTAAAAT ATGCCTTTCC ATCGGGGCAG GGCGAGGTTG TTCTCGGCTT TCAGCGCCGG
GAGGGTGAGG TTGCACTGAC CGTCAGCGAT AACGGGATCG GCCTCAGTGG CAAATCGGAG
GGATCAGGAC TTGGCACCCA GTTCGTCAAA GCTTTCGTCA AGCAACTCGG CGGTTCCCTG
GCCAGCGCGA CAAGCTCCAG TGGCACGACG TATACCGTCA GGCTTCCACC GTCGATCTTG
GCGGAATGA
 
Protein sequence
MSIDDVTEAR LASAEAERSW ILAQNIVDTV RDPQLVLEHD MSVVFASRSF LKLFGVQSTE 
VVGQQLKTLG DGQWNVAALN DLLERVLPRD EHVDGLLLED DFPGLGRRVF KINARKIFRP
GNHVTRMLVV FEDATEAVLL DRHRDILAAE LAHRIKNSLQ IISSFVSHEI RRAAEPCAEG
YKAMQARIRA VAELYDVIAQ SSAFGPVNME TYLRGINNTI RKSLLSPNSN ITISTKTEPL
SILPDHAVSI GLIVNELATN AVKYAFPSGQ GEVVLGFQRR EGEVALTVSD NGIGLSGKSE
GSGLGTQFVK AFVKQLGGSL ASATSSSGTT YTVRLPPSIL AE