Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1636 |
Symbol | exsG |
ID | 7387424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1367090 |
End bp | 1368118 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650973 |
Product | two component sensor kinase |
Protein accession | YP_002549178 |
Protein GI | 222148221 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.264656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATTG ATGACGTCAC CGAAGCGCGT CTTGCCAGCG CGGAGGCTGA GCGGAGCTGG ATTCTTGCGC AGAATATTGT CGATACGGTC CGTGATCCAC AGCTGGTGCT GGAGCACGAC ATGAGCGTTG TGTTTGCCAG CCGTTCTTTC CTGAAACTTT TCGGCGTTCA ATCCACGGAG GTTGTCGGCC AGCAGTTGAA AACGCTGGGG GACGGCCAGT GGAATGTGGC GGCGCTCAAC GATCTTCTGG AACGCGTTCT GCCACGCGAC GAGCATGTCG ATGGCTTGCT GCTGGAGGAC GACTTTCCCG GTCTGGGCCG GCGTGTGTTC AAGATCAATG CCAGGAAAAT ATTTCGGCCC GGCAATCATG TCACTCGGAT GCTCGTCGTG TTCGAGGACG CAACGGAGGC CGTGCTGCTC GACAGGCACA GGGATATATT GGCAGCGGAA CTGGCCCATC GTATCAAGAA CAGCCTGCAA ATCATCTCCT CTTTTGTGTC CCATGAGATT CGCCGCGCCG CAGAGCCTTG TGCCGAAGGA TATAAGGCGA TGCAGGCGCG GATCAGGGCC GTCGCCGAAC TGTATGACGT CATTGCTCAA TCCAGCGCGT TTGGTCCAGT CAATATGGAA ACCTATCTGA GAGGCATCAA CAACACGATC CGCAAGAGCC TTCTAAGCCC GAATTCAAAC ATCACGATCA GCACGAAGAC CGAGCCGTTA AGCATTCTCC CTGATCATGC CGTATCGATC GGCTTGATCG TCAATGAACT TGCCACCAAT GCCGTAAAAT ATGCCTTTCC ATCGGGGCAG GGCGAGGTTG TTCTCGGCTT TCAGCGCCGG GAGGGTGAGG TTGCACTGAC CGTCAGCGAT AACGGGATCG GCCTCAGTGG CAAATCGGAG GGATCAGGAC TTGGCACCCA GTTCGTCAAA GCTTTCGTCA AGCAACTCGG CGGTTCCCTG GCCAGCGCGA CAAGCTCCAG TGGCACGACG TATACCGTCA GGCTTCCACC GTCGATCTTG GCGGAATGA
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Protein sequence | MSIDDVTEAR LASAEAERSW ILAQNIVDTV RDPQLVLEHD MSVVFASRSF LKLFGVQSTE VVGQQLKTLG DGQWNVAALN DLLERVLPRD EHVDGLLLED DFPGLGRRVF KINARKIFRP GNHVTRMLVV FEDATEAVLL DRHRDILAAE LAHRIKNSLQ IISSFVSHEI RRAAEPCAEG YKAMQARIRA VAELYDVIAQ SSAFGPVNME TYLRGINNTI RKSLLSPNSN ITISTKTEPL SILPDHAVSI GLIVNELATN AVKYAFPSGQ GEVVLGFQRR EGEVALTVSD NGIGLSGKSE GSGLGTQFVK AFVKQLGGSL ASATSSSGTT YTVRLPPSIL AE
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