Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1633 |
Symbol | |
ID | 7387421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1364498 |
End bp | 1365043 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650970 |
Product | hypothetical protein |
Protein accession | YP_002549175 |
Protein GI | 222148218 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGAGC CCGTCTTGGA TAAGAGCCCT GATGCCTTCC GTACGATCAG CGAAGTGGCG GACGATCTCG ATTTACCGCA GCATGTGCTG CGATTCTGGG AGACCAGGTT TCCGCAGATC AAGCCGTTGA AGCGCGGCGG CGGACGGCGC TACTACCGTC CTGACGATAT CGAATTGCTG AAGGGCATTC GCCATCTGCT CTATGATCAT GGCTATACGA TCAAAGGCGT GCAGAAGCTT CTGAAAACCA ATGGCAATAA ATTCGTCATG GCTGTCGCTT CCGGCGATCT GGCGACCATG GAAGCCCTGG TTGCCGCTGG TCAATCCAGC AATGACGATC CCAAACTTGG CAGCGACGAC GATCAGGTCG TCGGTCATGC AAAGTCGCGC ACCAGCAGCC GATTCTTTAA CTTCGGCGGT GGCGACGACA GCGCTCTCGA CATTTCCGCT GGTCGCGGTT CCGTCGGCAA AGAAGATCGG GCGCTGCTTC AGGAAACCCT GTTTGATCTG TTGGAATGTA AGCGGCTATT GGATCAGGTC CGCTAG
|
Protein sequence | MMEPVLDKSP DAFRTISEVA DDLDLPQHVL RFWETRFPQI KPLKRGGGRR YYRPDDIELL KGIRHLLYDH GYTIKGVQKL LKTNGNKFVM AVASGDLATM EALVAAGQSS NDDPKLGSDD DQVVGHAKSR TSSRFFNFGG GDDSALDISA GRGSVGKEDR ALLQETLFDL LECKRLLDQV R
|
| |