| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1628 |
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| Symbol | plsX |
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| ID | 7387418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1361834 |
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| End bp | 1362877 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650967 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_002549172 |
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| Protein GI | 222148215 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGGCG ATTTCGGTCC CGAAGTCGTT ATTCCGGGCG CCGCCCGGGC GCTGGAGCGC
CATCCGGAGA TTACATTCAT CCTGTTTGGC CAGCGGGAAA AGTGCGAGCC TTTTCTTGCC
AAATATCCAA AATTGAAAGC AAAATCCGTC TTCCACGATT GCGAAGTGGC AATCGCCATG
GACGAAAAGC CAAGCCAGGC GCTGCGGCGT GGTCGCTATG TCTCCAGCAT GTGGCGCTCG
ATTGAGGCCG TCAAAACAGG CGAGGCGGAT GTCGTCGTGT CTGCCGGTAA TACCGGCGCA
CTGATGGCGA TGTCCAAGTT CTGCCTGCGC ACCATGGCCA ATGTGGAGCG CCCGGCGATT
GCCGGGATCT GGCCGACCCT GAAGGGGGAA AGCATTGTGC TTGATATCGG CGCCACCATT
GGTGCCGATG CGCAACAATT GCTGGATTTC GCCGTCATGG GCGGCGCTAT GGCCCGGGCT
TTATTCCAGA TTGATCGTCC TTCGATTGGC TTGTTGAATG TCGGCGTCGA GGAAATCAAG
GGTCAGGAAG AAGTGCGCGA AGCGGGCCGC ATGTTGCGTG AGGCAGGTCT GGACACCCTA
AACTATGCCG GTTTCGTCGA GGGAGACGAT CTCGGCAAGG GCACCGTCGA TGTCGTCGTC
ACGGAAGGCT TCACTGGCAA TATCGCCTTG AAGGCTGCCG AGGGCACGGC GCGCCAGATT
GCCACCTATC TGAGGGCGGC GATGTCGCGC AGCCTGATGT CGAAGATCGG CTATTTCTTC
GCCAAGGGGG CCTTTGATGC GCTCAAGGAC AAGATGGACC CGCGCAAGGT GAATGGCGGC
GTCTTTCTCG GTCTGAACGG CATTGTCATC AAGAGCCATG GCGGTACGGA CGCGGAAGGT
TTCGGTTCAG CCATCGAGGT TGGCTATGAC ATGGCGCGCA ATGGTTTGAC CCAGAAAATT
GAAAATGATT TGAAACTTTA TCACACTCGC TTTCCATCGA CGTCCAGGGC TGGTTCCTCC
AGCGCCGGGC CGGAAGCAGC GTGA
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| Protein sequence | MGGDFGPEVV IPGAARALER HPEITFILFG QREKCEPFLA KYPKLKAKSV FHDCEVAIAM
DEKPSQALRR GRYVSSMWRS IEAVKTGEAD VVVSAGNTGA LMAMSKFCLR TMANVERPAI
AGIWPTLKGE SIVLDIGATI GADAQQLLDF AVMGGAMARA LFQIDRPSIG LLNVGVEEIK
GQEEVREAGR MLREAGLDTL NYAGFVEGDD LGKGTVDVVV TEGFTGNIAL KAAEGTARQI
ATYLRAAMSR SLMSKIGYFF AKGAFDALKD KMDPRKVNGG VFLGLNGIVI KSHGGTDAEG
FGSAIEVGYD MARNGLTQKI ENDLKLYHTR FPSTSRAGSS SAGPEAA
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