| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1610 |
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| Symbol | glyA |
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| ID | 7387406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1350531 |
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| End bp | 1351820 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650955 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_002549160 |
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| Protein GI | 222148203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATA CCGATGCTTT CTTTTCCCGT CCGCTTGCCG AAACCGACCC GGATATTTTT
GGTGCGATTG AAAAGGAGCT CGGTCGTCAA CGCCATGAAA TCGAGCTGAT TGCGTCTGAA
AACATCGTCT CGCGCGCCGT GCTGGAAGCG CAAGGCTCGA TCATGACCAA CAAATATGCC
GAGGGCTATC CGGGCAAGCG CTATTACGGT GGCTGTCAGT TCGTGGATAT TGCCGAGGAA
TTGGCGATTG AGCGCGCCAA GAAGCTGTTT GGCGTCAATT TTGCCAATGT TCAGCCCAAT
TCCGGTTCGC AGATGAACCA GGCCGTGTTC CTGGCACTGT TGCAGCCGGG CGATACCTTC
ATGGGTCTCG ACCTGAATTC CGGGGGCCAT CTGACCCACG GTTCGCCGGT CAACATGTCC
GGCAAGTGGT TCAACGTCGT CTCCTATGGC GTGCGTCAGG ACGATAATCT TCTGGACATG
GATGCGGTGG CTGAATCGGC TCGTAAACAC AAGCCCAAGC TGATCATCGC CGGTGGCACA
GCCTATTCGC GGATCTGGGA CTGGAAGCGC TTCCGCGAGA TCGCCGACGA AGTCGGCGCC
TATCTGATGG TTGACATGGC CCATATCGCC GGTCTGGTTG CCGGTAACCA GCATCCGTCG
CCGTTCCCGC ATTGCCACGT CGCCACCACC ACGACCCACA AGTCGCTGCG TGGCCCGCGT
GGCGGCATGA TCCTCACCAA TGACGAGGAT CTGGCCAAGA AATTCAATTC GGCTGTCTTC
CCAGGCCTCC AGGGCGGCCC GCTGATGCAT GTGATTGCCG CCAAGGCGGT TGCCTTCGGT
GAGGCCTTGC AGCCGGAATT CCAGGATTAT GCCGCTCAGG TGGTGAAAAA CGCCAAGGCC
CTGTCCGAAA CCCTGGTCAA GGGTGGCCTC GATATCGTCT CCGGCGGTAC CGACAATCAT
TTGATGCTGG TCGACCTGCG CAAGAAGAAC GCCACCGGCA AGCGCGCCGA GGCAGCCCTT
GGCCGCGCCT ATGTCACCTG CAACAAGAAC GGCATTCCGT TCGATCCTGA AAAGCCCTTC
GTTACTTCTG GTGTTCGCCT TGGCACGCCA GCTGGCACGA CCCGTGGCTT CAAGGAGGCT
GAATTCATCG AAATCGGCAA TCTGATCGTT GAGGTTCTCG ACGGTCTGAA GGTTGCCAAT
TCCGACGAGG GCAATAGCGC CGTCGAGGCA AGCGTGCGCG ACAAGGTCAT TGGCCTGACG
GGCCGTTTCC CGATGTATCC TTACCTGTAA
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| Protein sequence | MANTDAFFSR PLAETDPDIF GAIEKELGRQ RHEIELIASE NIVSRAVLEA QGSIMTNKYA
EGYPGKRYYG GCQFVDIAEE LAIERAKKLF GVNFANVQPN SGSQMNQAVF LALLQPGDTF
MGLDLNSGGH LTHGSPVNMS GKWFNVVSYG VRQDDNLLDM DAVAESARKH KPKLIIAGGT
AYSRIWDWKR FREIADEVGA YLMVDMAHIA GLVAGNQHPS PFPHCHVATT TTHKSLRGPR
GGMILTNDED LAKKFNSAVF PGLQGGPLMH VIAAKAVAFG EALQPEFQDY AAQVVKNAKA
LSETLVKGGL DIVSGGTDNH LMLVDLRKKN ATGKRAEAAL GRAYVTCNKN GIPFDPEKPF
VTSGVRLGTP AGTTRGFKEA EFIEIGNLIV EVLDGLKVAN SDEGNSAVEA SVRDKVIGLT
GRFPMYPYL
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