| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1595 |
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| Symbol | parC |
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| ID | 7387396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1336410 |
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| End bp | 1338686 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650945 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_002549150 |
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| Protein GI | 222148193 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAA GTCTTATACC GCCTGGCGAC GGTGGCGATA ACGTCACACC GATCGATCTG
AAATATGCGC TGGAAGAGCG CTACCTGGCC TATGCGCTGT CGACCATCAT GCACCGGGCG
CTGCCTGACG TGCGCGATGG GCTGAAGCCG GTGCATCGGC GCATCATCCA TGCGATGAGC
GAAATGGGGA TCAGGCCCAA TTCCGCCTTC AAGAAATGCG CCCGTATCGT CGGCGATGTC
ATCGGTAAAT TTCACCCGCA TGGCGACCAG TCGGTCTATG ACGCGCTGGT GCGGCTCGCC
CAGGATTTTT CGCAGCGCTA TCCCGTTGTC GATGGTCAGG GCAATTTCGG CAATATCGAC
GGCGATTCGG CGGCTGCCTA CCGATATACC GAAGCACGGA TGACCGACGT TGCTGGGCTT
CTGCTCGAGG GTATCGAGCA GGATGCGGTG GATTTTCGCC CGACCTATAA CGAGGAAGAC
GACGAGCCGG TCGTGTTGCC CGGCGCTTTC CCCAATCTGC TCGCCAATGG CGCCTCCGGC
ATCGCGGTCG GCATGGCAAC CTCGATCCCG CCGCACAATG CCCATGAGCT GTGTGATGCG
GCGCTTTATC TGATCAAGAA CCGTAGCGCT TCTGTCGAAG AGCTGTTTGC CGATCCGGCT
CATCCGCAGC GCGGCGGCAT CGAGGGACCG GATTTCCCGA CCGGTGGCAT TGTCATCGAA
AGCCGCGAAA GCATGCTGGA AACCTACCGC ACCGGACGCG GCGGTTTCCG AGTGCGGGCC
AAATGGGAGA CGGAAGACCT CGGGCGCGGC GGCTATCAGA TCGTCATTAC CCAGATCCCG
TTCCAGGTGC AGAAATCACG GTTGATCGAA AAGATCGCCG AATTGCTGAT CGCCAAGCGC
CTGCCGTTGC TGGAAGACAT TCGCGATGAG TCAGCCGAAG ACGTTCGCGT TGTGCTGGTG
CCGAAGAGTC GTACCGTCGA TCCGACCATC CTGATGGAAT CGCTATTCAA GCTGTCTGAG
CTGGAAAGCC GCATTCCCTT GAACATGAAC GTCCTCTCCC AAGGTAAAGT ACCGAAGGTG
ATGGCGCTGA ACGAGGTGCT GCTGGAATGG CTGGATCACC GCAAGGACGT GTTGGTGCGC
CGGTCGCGCT TCCGTCTGGC GGCCATCGAC CGGCGGCTGG AAATTCTCGG CGGCTTGCTG
ATCGCCTATC TCAATCTCGA CGAGGTGATC CGCATCATCC GCGAGGAAGA CGAGGCCAAG
GACGCACTGA TTGCCCGCTT CGAGCTGACG GACAACCAGG CCGAAGCCAT CTTGAACATG
CGGTTGCGCA ATTTGCGCAA ACTCGAGGAA TTCGAGATCC GCAAGGAACA TGATGCTCTG
TCCAAGGAAA AGGCAGAGAT CGAGACATTG CTGGCCTCTG ACGACTTGCA ATGGGGAACG
ATTGCCTCGG AAATCGGTGA GGTGAAGAAG AAATATGCCA AGGCGACCGA CATTGGCCGC
CGCCGCACGC TGTTTGCCAA TGCGCCGGAT GCCGATGTCG ATGCCATTCA GCAGGCGATG
ATCGAGAAAG AGCCGATCAC CGTCGTCATC TCCGAAAAGG GCTGGATACG GGCGCTTAAG
GGCCACAGCT ATGACAAGGT CAGCCTGACC TTCAAGGAAG GCGATGGTCT GCGCGTGGCC
TTCCCCGCCC AGACCACAGA TAAGATCCTG CTGGTGACCA CCGGTGGCAA GGTCTATACG
CTTGGCGGCG ACAAGCTGCC CGGCGGGCGC GGCCATGGCG AGCCGATCCG AATCATGGTC
GATATGGAAA ACGATCAGGA TGTGCTGACG GCTTTCGTCC ACGATCCAGC CCGCAAGCTG
CTGATCGCCT CGACGGGTGG CAATGGCTTC ATCGTCGCGG AAAGCGACAT CACCGCCAAT
ACCCGCAAGG GCAAACAGGT GATGAATGTC GGCATGCCGG ATGAAACCAA GCTGGTCGTG
CCGATTTCCG GCGACCATGT GGCTGTGGTC GGCGAAAATC GCAAAATGGT GGTATTCCCG
CTGGCACAGG TCCCGGAAAT GAGCCGCGGC AAGGGCGTGC GCCTGCAACG CTATAAGGAC
GGCGGTGTCT CCGACATCAA GTGCTTTACC CTTGCAGACG GGCTTTCCTG GGAAGACAGT
GCGGGCCGGA GCTTCACCCG CAGCAAGGAC GAACTGTTGG AATGGCTGGG CGATCGGGCC
GGGCCTGGAC GCACGGTTCC CAAGGGCTTC CCGCGCAGCG GCAAATTCAG CGGCTGA
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| Protein sequence | MGKSLIPPGD GGDNVTPIDL KYALEERYLA YALSTIMHRA LPDVRDGLKP VHRRIIHAMS
EMGIRPNSAF KKCARIVGDV IGKFHPHGDQ SVYDALVRLA QDFSQRYPVV DGQGNFGNID
GDSAAAYRYT EARMTDVAGL LLEGIEQDAV DFRPTYNEED DEPVVLPGAF PNLLANGASG
IAVGMATSIP PHNAHELCDA ALYLIKNRSA SVEELFADPA HPQRGGIEGP DFPTGGIVIE
SRESMLETYR TGRGGFRVRA KWETEDLGRG GYQIVITQIP FQVQKSRLIE KIAELLIAKR
LPLLEDIRDE SAEDVRVVLV PKSRTVDPTI LMESLFKLSE LESRIPLNMN VLSQGKVPKV
MALNEVLLEW LDHRKDVLVR RSRFRLAAID RRLEILGGLL IAYLNLDEVI RIIREEDEAK
DALIARFELT DNQAEAILNM RLRNLRKLEE FEIRKEHDAL SKEKAEIETL LASDDLQWGT
IASEIGEVKK KYAKATDIGR RRTLFANAPD ADVDAIQQAM IEKEPITVVI SEKGWIRALK
GHSYDKVSLT FKEGDGLRVA FPAQTTDKIL LVTTGGKVYT LGGDKLPGGR GHGEPIRIMV
DMENDQDVLT AFVHDPARKL LIASTGGNGF IVAESDITAN TRKGKQVMNV GMPDETKLVV
PISGDHVAVV GENRKMVVFP LAQVPEMSRG KGVRLQRYKD GGVSDIKCFT LADGLSWEDS
AGRSFTRSKD ELLEWLGDRA GPGRTVPKGF PRSGKFSG
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