| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1591 |
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| Symbol | |
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| ID | 7387392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1331111 |
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| End bp | 1332346 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650941 |
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| Product | MFS permease |
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| Protein accession | YP_002549146 |
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| Protein GI | 222148189 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.37561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA TACGTCCGCT TTTGCCCCTG CTCGTCACCG CCGGTATTCT GATCGGCGGC
AATGGCTTGC AGGGCACGTT CATTTCGCTG CGTGCCCTTG AAGAAGGGTT CTCGACGACG
ATGATCGGCG TGGTCGGCAC CGGCTATAAT ATCGGCTTTG CCATCGGCTG CATCTATGTG
ACGAGGCTGA TCCGGGACAT CGGCCATATC CGCGCCTTTG CCGGGCTGGC GGCGATTGCC
TCTGCCGCCT CCATCGCCAT GCTGATCTTC ATTCACCCTG CCGCATGGTT TTCGATGCGG
CTGATACAGG GCGTCTGTTT TGCCGGTCTG TTCGCCGTGG TGGAAAGCTG GCTCAATGCC
CGCGTCACCA ACGAGACACG GGCGCGCACC TTGTCGATCT ATCGCTTCGT CGATCTGGGA
TCGGTCACTG TGGCGCAATA TATCATTCCG GCGGTCGGCA TTTCTGGTGT CGATCTGTTT
GCGCTGATCG CCATGGCGCT ATCTCTGTCT CTGGTACCGA TTTCCTTTGC CGACCGCACC
AGCCCTGCCC CACCGCGGCA TGTGGAGTTT AACATCAAGG CCCTGTGGGG CATTTCGCCG
CTGGCGACCA TCGGCTGTAT TGTGGTGGGG CTTACCAATT CCAGTTTCCG GTCGCTCGGA
CCGATCTATG CCGAAGGCAT CGGCATGTCG GTCACGGCCA TCGTCACCTT CATGAGCATC
GGGATTTTTG CCGGTGTCGT GCTACAATAT CCGCTCGGCC ATTACTCCGA CAAGCTGGAT
CGGCGCACCA TCATTCTGGT GGCCGCAGGC GGTGCCATGC TGGCTGGTCT GTTCCTGACC
TTCGTGGCGG GAACAAGCGA AATCCTCAAT TTTATCGGGA TTTTCCTGTT CGGCGCCTTT
GCCATGCCGC TTTATTCGCT GTGCTCAGCC CATGCCAATG ACCATGCCGC CCCCGGCCAG
CATGCGCTGG TCTCGGCAGG AACCCTGTTC TTCTGGTCCT GCGGGGCCGT GGTCGGGCCG
ATGTTTGCCT CCGTCCTGCT CGACCATTTC GGACCAAGGG CGCTGTTTTC CTATATGGTC
GTCGTGCTGG CGCTGTTCAT CCTCTACACC CTGCTGCGGA TGCGGGCGCG CGAAGCGGTC
CCGACGGAGG AGCGGCGCTA TCCCTTCCGG GCGCTGCTAC GCACCTCCGC CTTTTTCAGC
AAGCTCGCTG CACCTGTGCG AACGAAGCGG AAATAG
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| Protein sequence | MNDIRPLLPL LVTAGILIGG NGLQGTFISL RALEEGFSTT MIGVVGTGYN IGFAIGCIYV
TRLIRDIGHI RAFAGLAAIA SAASIAMLIF IHPAAWFSMR LIQGVCFAGL FAVVESWLNA
RVTNETRART LSIYRFVDLG SVTVAQYIIP AVGISGVDLF ALIAMALSLS LVPISFADRT
SPAPPRHVEF NIKALWGISP LATIGCIVVG LTNSSFRSLG PIYAEGIGMS VTAIVTFMSI
GIFAGVVLQY PLGHYSDKLD RRTIILVAAG GAMLAGLFLT FVAGTSEILN FIGIFLFGAF
AMPLYSLCSA HANDHAAPGQ HALVSAGTLF FWSCGAVVGP MFASVLLDHF GPRALFSYMV
VVLALFILYT LLRMRAREAV PTEERRYPFR ALLRTSAFFS KLAAPVRTKR K
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