| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1566 |
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| Symbol | |
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| ID | 7387373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1311621 |
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| End bp | 1312205 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650922 |
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| Product | NTP pyrophosphohydrolase MutT family |
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| Protein accession | YP_002549127 |
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| Protein GI | 222148170 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.250643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT TTGACGCGAC CAGCATTACC ATTGTCGAGG ACAAGACGCT GTGGAAGGGC
TGGAGCCATC TGCGCAAGAT GGTGTTCGAT TATGCAAAAC CGGATGGCAC CACCCAGCGC
CTCAGCTGGG AAGTCTTTGA TCGCGGCCAT GCGGTGGCAA TCCTGCTGCA TGACCCCTCC
AAGAAGACCT TGTTGCTGGT GCGGCAGTTT CGCATTCCCG CCTATATGAT GGGTGACAAG
CCCTTTCTGC TGGAAGTGCC AGCGGGCATG ACCGATGGCG AGGACGCCGA AAAGGCCGTG
ACCCGCGAGG TCGAGGAGGA GACGGGCTAT CACATTGCCG CGCCACGTTT CCTGTTCACC
GCCTATATGT CGCCGGGAGC GGTAACGGAA AAGATCCACT TCTTTTACTC GCCCATCGAC
GAGGCGCAAA AACTGTCGCT CGGCGGCGGG CTGGAAGCCG AACACGAAGA TCTGGAACTG
GTGGAAGTGC CGCTTAAGGA TGCGATTTCG ATGATCGAGC GGGGCGACAT CGTCGATGGC
AAGACCATCA TGCTGCTGCA ATGGGCGGCG CTCAATCTGG CCTGA
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| Protein sequence | MSKFDATSIT IVEDKTLWKG WSHLRKMVFD YAKPDGTTQR LSWEVFDRGH AVAILLHDPS
KKTLLLVRQF RIPAYMMGDK PFLLEVPAGM TDGEDAEKAV TREVEEETGY HIAAPRFLFT
AYMSPGAVTE KIHFFYSPID EAQKLSLGGG LEAEHEDLEL VEVPLKDAIS MIERGDIVDG
KTIMLLQWAA LNLA
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