| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1564 |
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| Symbol | |
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| ID | 7387371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1308583 |
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| End bp | 1309434 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650920 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549125 |
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| Protein GI | 222148168 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTACC GCCACATCTA CCACGCAGGC AATTTCGCGG ACGTGCTGAA GCATGCCGTG
CTGGCGCGGC TGGTCATTTA TCTCCAGCAG AAGGACAAGG CATTCCGGGT GCTGGATACC
CATGCTGGCA TCGGTCTTTA CGACCTATCC TCCGACGAAT CGCAAAAAAC CGGCGAATGG
CTAGGCGGAA TTGGCAAATT GCTGGACGCC GAACTGACAC CGGCAGCGAC CGATGTGCTG
AAGCCCTATC TCGATGTCGT GCGGGCACTG AACCCGCAGG GCGGCCTGAC CCGCTATCCC
GGCTCGCCGA AGCTGGCGCG CGACCTGTTT CGCCCGCAGG ACCGTTTGTC GGCGATGGAG
CTGCATCCGG ACGATTGCCG CACACTTTCC CGGCTGTTCG AAGGCGATTA CCAGGCGCGG
ATCACCGAAC TGGATGGCTG GCTGGCGCTG GGCGCTCATC TGCCACCCAA GGAAAAACGC
GGCATCGTGC TGGTTGATCC GCCCTTCGAG CTGGACGGTG AATATGAGCG GCTGGTCGAT
GGATTGGCGC GGGCCTATCG CCGGTTTTCT GCCGGGGTCT ATTGTCTCTG GTATCCCATC
AAGAAGGGCG CGCCGATTGC CGCTTTTCAC GAGGCCTTGA AAGAGACGGG CATCCCCAAG
ATGCTCTGCG CGGAACTGTC GGTGAAAAGC GACCGCGATT TGACCGGCCT GTCTGGTTCA
GGCCTGATCA TCGTCAATCC GCCCTTCACC CTCAAGGATG AACTGCATGC GCTGCTGCCC
GAATTGAAGC GGGTGCTGGC GCAAGACCGC TACGCTTCGC AGCGCTGCTT CTGGCTGCGC
GGCGAAGAGT AA
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| Protein sequence | MNYRHIYHAG NFADVLKHAV LARLVIYLQQ KDKAFRVLDT HAGIGLYDLS SDESQKTGEW
LGGIGKLLDA ELTPAATDVL KPYLDVVRAL NPQGGLTRYP GSPKLARDLF RPQDRLSAME
LHPDDCRTLS RLFEGDYQAR ITELDGWLAL GAHLPPKEKR GIVLVDPPFE LDGEYERLVD
GLARAYRRFS AGVYCLWYPI KKGAPIAAFH EALKETGIPK MLCAELSVKS DRDLTGLSGS
GLIIVNPPFT LKDELHALLP ELKRVLAQDR YASQRCFWLR GEE
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