Gene Avi_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1561 
SymbolropB 
ID7387369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1307228 
End bp1307866 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID643650918 
Productouter membrane protein 
Protein accessionYP_002549123 
Protein GI222148166 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACTC TCGTTATGAT TTTGCTGGCA TCGTCTGCTG GTCTTTCCCT CGTCACCGGC 
GCTCACGCTG CCGATGCCGT CATGTCGGTG CCGGAAGCAC CCGCAGCCGT CGATATGCCG 
GCTCCGGTCA GCAACTGGGC CGGTGCTTAT GTCGGCGGTG CAGGCACCTA TACAATGGGT 
CGTTCGCACG GCAGCAAGTT TAGCGCCCGT GCCTTCGGCG GCCAGGTCTA TGGCGGCTAC 
AACATGCAGA ACGACAAGAT CGTTTACGGT GGTGAAGCTG ACATCGGTTA TGACGGCAAT 
GGTAGCCGCT CCGGCGCTGG CCTGAATGGC AAGCAGGGCG TAAACGGCTC TATTCGTGGC 
CGCGTCGGCT ACGACCTCAA CCCATTCATG GTTTACGGCA CAGCCGGTGT GGCTGCGGCT 
GACACCAAGA TTTCCGGTGC TGGCGGTTCT GACAGCAAGG CCGCTCTCGG CTACACGGTC 
GGTGCAGGCG TTGAAGCCAT GGTGACCAAC AACATCACCA CTCGTGTGGA ATACCGCTAC 
ACCGATTACC AGAACAAGGA CTACAACATC GGTGGTTCCA AGGTATCGCG CGGCTTTGAC 
GACCAGAGCG TCAAGGTTGG TATCGGCATG AAGTTCTGA
 
Protein sequence
MRTLVMILLA SSAGLSLVTG AHAADAVMSV PEAPAAVDMP APVSNWAGAY VGGAGTYTMG 
RSHGSKFSAR AFGGQVYGGY NMQNDKIVYG GEADIGYDGN GSRSGAGLNG KQGVNGSIRG 
RVGYDLNPFM VYGTAGVAAA DTKISGAGGS DSKAALGYTV GAGVEAMVTN NITTRVEYRY 
TDYQNKDYNI GGSKVSRGFD DQSVKVGIGM KF