| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1558 |
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| Symbol | uvrC |
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| ID | 7387367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1303967 |
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| End bp | 1306039 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650916 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_002549121 |
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| Protein GI | 222148164 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.367704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAG GGAAGCAGCC GGAAGGCGGC ATTCTCTATG ACGGCACAGA AGATGACGAG
GATGACATTG CGACAGACGG CGCAATCGAC CCCGCGGTCG CTGCCGTTCT GCCGCCGATC
GACTGGAACG AAGGCGCCCT GCATGGCAGC GGCCTGACCG GTGCCGACCT GATTGCGGAA
TTCGTCAAGA AACTGCCCAA CAATCCCGGC GTCTACCGGA TGATGAATGG CGACGGCGAC
GTGCTCTATG TCGGCAAGGC CCGCAGCCTG AAGAAGCGCG TCAGCAATTA CGCGCAAGGC
CGCCTGCATT CCAACCGCCT GACCCGCATG GTGCGCGAAA CCGCCCATAT GGAATTCGTC
ACGACCCGCA CCGAGGTCGA GGCGCTGCTG CTCGAAGCCA ACCTCATCAA GCGTTTGCGG
CCGCGCTATA ACGTGCTGTT GCGCGACGAC AAGAGCTTTC CCTATATCCT GATTACCGGC
GATGGCCGCG CACCCGCCAT TTACAAACAT CGCGGTGCGC GCGCCCGCAA GGGCGATTAC
TTCGGCCCCT TCGCCTCGGC GGGCGCTGTC GGGCGCACCA TCAATTCGCT ACAACGGGCC
TTTCTTTTGC GTACCTGCAC CGACAGCGTG TTCGAGAGCC GCACGCGGCC CTGTCTTCTT
TACCAGATCA AGCGCTGCTC CGGCCCCTGC ACCCATGAAA TCAGCGACGC CGATTACGGC
GTGCTGGTGA AGGAAGCCAA GGATTTCCTG TCCGGCAAGA GCCAGAACGT CAAGGAAGCC
ATGGCGCGGA CGATGAACGA GGCGGCGGAA ACCCTGGATT TCGAACGCGC CGCCGTGTTC
CGCGACCGGC TTGCTGGCCT CTCTCATGTG CAGAGCCACC AGGGCATCAA CCCGGCGGGC
GTTGAGGAAG CCGATATTTT CGCCATCCAT CACGAGGGCG GGCTGACCTG TATCCAGGTG
TTCTTTTTCA GGACCGGACA GAACTGGGGC AACCGCGCCT ACTTCCCGAA GGCCGATCCG
CAGATGACCG GCGCGGAAGT GTTGAGCGCC TTTCTGGCAC AGTTTTACGA CGACAAGCCC
TGTCCCCGGC AAGTGCTGCT GTCGGAGGGG ATTGACGAAC AAGATTTGTT GAGTCTCGCG
CTCTCCGAAA AGGCGGGATA CAAGGTGACG ATCCTGGTGC CGCAGCGCGG CGAGAAGAAG
GATCTGGTCG AGCATGTGCA TGGCAATGCC CGCGAAGCGC ATGGCCGCAA GCTGGCGGAA
ACAGCCTCGC AAGAACGGCT GTTGAAAGGC TTTGCCGAGA CATTCGCACT CGCCTACGTG
CCGCGCCGCA TCGAGATCTA CGACAATTCC CATATCATGG GCACCAATGC GGTGGGCGGC
ATGGTGGTGG CCGGGCCGGA AGGCTTCGTG CGCAACCAGT ACCGCAAGTT CAACATCAAA
TCGACCGACA TCACCCCCGG CGACGATTTC GGCATGATGC GCGAAGTGAT GACACGGCGC
TTTTCGCGTC TGCTGAAGGA AGAAGGCAAG CCGGACCGCA ACCCAAATCG CAGCACCGGT
ACCGAAGAAG GTGCGGATGC AGTTTTCCCG GCCTGGCCCG ACGTGATCCT GATCGATGGT
GGCCAGGGCC AGATGACCGC CGTCAGGGCA ATCCTGAAAG AGCTGGACAT TACCGATTGC
GTCACCGCCA TCGGCGTCGC CAAGGGCGTA GACCGCGATG CAGGCCGCGA GCGTTTCTTT
GCGCAGGGCA AGCCGGACTT CACCTTGCCG CCGCGCGATC CGGTGCTGTA TTTCATCCAG
CGGCTGCGCG ACGAAGCACA TCGATTCGCC ATCGGCTCGC ACCGGGCGCG GCGCAAGAAG
GAAATGGTCA AGAACCCATT GGATGAGATC GGCGGCATCG GACCAACCCG CAAACGGGCG
CTGCTACAGC ATTTCGGCAC GGCCAAGGCG GTCTCGCGGG CGGCGATGAA CGATCTGATG
GCTGTGGACG GCATTTCGGA AGCCGTTGCA CGACAAATTT ACAATCATTT TCATGAAAAC
TCTGGTCATT CTCACGAAAA CAGCCGGGAA TAG
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| Protein sequence | MTPGKQPEGG ILYDGTEDDE DDIATDGAID PAVAAVLPPI DWNEGALHGS GLTGADLIAE
FVKKLPNNPG VYRMMNGDGD VLYVGKARSL KKRVSNYAQG RLHSNRLTRM VRETAHMEFV
TTRTEVEALL LEANLIKRLR PRYNVLLRDD KSFPYILITG DGRAPAIYKH RGARARKGDY
FGPFASAGAV GRTINSLQRA FLLRTCTDSV FESRTRPCLL YQIKRCSGPC THEISDADYG
VLVKEAKDFL SGKSQNVKEA MARTMNEAAE TLDFERAAVF RDRLAGLSHV QSHQGINPAG
VEEADIFAIH HEGGLTCIQV FFFRTGQNWG NRAYFPKADP QMTGAEVLSA FLAQFYDDKP
CPRQVLLSEG IDEQDLLSLA LSEKAGYKVT ILVPQRGEKK DLVEHVHGNA REAHGRKLAE
TASQERLLKG FAETFALAYV PRRIEIYDNS HIMGTNAVGG MVVAGPEGFV RNQYRKFNIK
STDITPGDDF GMMREVMTRR FSRLLKEEGK PDRNPNRSTG TEEGADAVFP AWPDVILIDG
GQGQMTAVRA ILKELDITDC VTAIGVAKGV DRDAGRERFF AQGKPDFTLP PRDPVLYFIQ
RLRDEAHRFA IGSHRARRKK EMVKNPLDEI GGIGPTRKRA LLQHFGTAKA VSRAAMNDLM
AVDGISEAVA RQIYNHFHEN SGHSHENSRE
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