Gene Avi_1556 details

Gene Information

• Locus tag: Avi_1556
• Symbol: pgsA
• ID: 7387366
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 1303264
• End bp: 1303854
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643650915
• Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: YP_002549120
• Protein GI: 222148163
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.361199
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTCGC GTACCTACAG CATCCCCAAC CTGTTGACAT ATGGCCGTAT TCTGGCCGTG 
CCTTTGATTG TTCTGTGCTT CTATCTGGAA GGCAAGCTGC AAAGCACCGA CTTTGCCCGC 
TGGGCGGCGC TGGCGATTTT CGTTGTCGCC TCGATTACCG ATTTCTTCGA TGGCTATCTG 
GCCCGGATCT GGAACCAGAC CTCCAATATC GGCCGGATGC TGGACCCGAT TGCCGACAAG 
CTGCTGGTCG CCACCTGCCT GTTGCTGATG GCCGCCGATA CAGAAAAAAC CATTGCCGGC 
TGGTCGCTCT GGGCCGCCAT CATCATCCTC TGCCGCGAAA TTCTGGTCTC CGGCCTGCGG 
GAATATCTGG CCGAGTTGAA GGTCAGCGTG CCTGTGACGC GAATCGCCAA GTGGAAAACC 
ACGGTGCAGA TGGTGGCGCT GGCCTTTCTG CTGGCCGGCC CGGCAGGCGA CAAGGTTCTG 
CCCTACACCA CCCAGATCGG CATCGGCCTG CTGTGGATCG CCGCCGCCCT GACCATGTAT 
ACCGGCTATG ACTATTTCAA AGCCGGTGTG AAACATATGG TGGACGAATG A 

 

Protein sequence

MASRTYSIPN LLTYGRILAV PLIVLCFYLE GKLQSTDFAR WAALAIFVVA SITDFFDGYL 
ARIWNQTSNI GRMLDPIADK LLVATCLLLM AADTEKTIAG WSLWAAIIIL CREILVSGLR 
EYLAELKVSV PVTRIAKWKT TVQMVALAFL LAGPAGDKVL PYTTQIGIGL LWIAAALTMY 
TGYDYFKAGV KHMVDE