| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1549 |
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| Symbol | |
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| ID | 7387361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1299127 |
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| End bp | 1301046 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650910 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002549115 |
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| Protein GI | 222148158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTTCCC GGCCATCATC GGCCAAAACG CCAGCCATGA TTACCATCAA TGACGTCTCC
GCCCGTATTG CAGGCCGCCT GCTGATTGAC CACGCCAGCA TTTCGCTGCC CACGGGTACG
AAAGCGGGCC TTGTCGGCCG TAATGGTGCG GGAAAATCCA CCCTGTTCAG GGTGATCACC
GGCGACCTGG GAGCCGAAAG CGGCTCGGTC TCCATTCCCA AGAATGCCAA GATCGGTCAG
GTGGCGCAGG AAGCCCCCGG CACCGAGGAC AGCCTGATCG AGATCGTCCT GGCTGCCGAC
AAGGAGCGCA CAGCGCTGAT GGCGGAGGCC GAAACGGCCA CTGACCCGAA CCGGATCGCC
GACATCCAGA TGCGGCTGGT GGATATCGAT GCCCATTCGG CGGAAGCGCG CGCCTCCAGC
ATTCTTGCCG GTCTCGGATT TAACCAGGAA GCACAGTTGC GCCCAGCCTC GGCCTTTTCA
GGTGGCTGGC GGATGCGCGT GGCGCTGGCC TCGGTGCTGT TTGCCGAACC GGATCTGCTG
CTGCTGGACG AACCGACCAA CTATCTCGAC CTTGAAGGTA CGCTCTGGCT GGAGGATTAT
ATCCGCCGCT ACCCGCACAC CGTCATCATC ATCAGCCATG ACCGCGACCT TCTCAACAAT
GCGGTCAATG CCATCGTCCA TCTCGACCAG AAAAAGCTGA CCTTCTATCG CGGCGGCTAT
GACCAGTTTG AGCGCCAGAA GGCCGAGAAC GACGAATTGC AGATGAAGTC GAAGGCCAAG
AGTGATGCGG CGCGCAAGCA TCTTCAAGCC TTCATCGACC GGTTCAAGGC CAAGGCCTCC
AAGGCAAAGC AAGCTCAGAG CCGTGTGAAA GCGCTGGAGC GCATGGGCAC GGTCTCCGCG
GTTATTGAAG ATCACGTCCA GCCCATCACC TTCCCAGAGC CGGAAAAGCA GCCAGCGTCG
CCGATCATCG CCATCAATGG CGGTTCCGTG GGTTACGAAC CCGGCAAGCC GATCCTGAAA
AACCTTAACC TGCGCATCGA TGCGGATGAC CGCATCGCGC TGCTGGGATC GAACGGCAAC
GGTAAGTCCA CCTTCGCCAA ATTCATTTCC GGTCGTCTTC CGCCCGAAAG CGGCGATCTG
CGGCTGGCGC CGAGCCTGAA GATCGGCTTC TTCGCCCAGC ATCAGTTGGA CGATCTGGTG
CCGGAAGACA CGCCAGTGGA ACACGTGCGC CGGTTGATGC CGCAGGCACC GGAAGCCAAA
GTGCGCGCCC GCGTCGCCCA GATGGGTCTG GCCACCGAAA AGATGGCGAC CGCCGCCAAG
GATTTGTCCG GTGGTGAAAA GGCCCGGTTG CTGATGGGCC TTGCTGCCTT TCACGCCCCC
AACCTGCTGA TCCTCGACGA GCCGACCAAC CATCTCGACA TCGACAGCCG CCGTGCGCTG
ATCGAAGCGC TGAATGATTA TGACGGTGCG GTTATCCTGA TCTCCCATGA TCGCCACCTG
ATCGAGGCAA CGGTGGACCG GCTCTGGCTG GTCAATAACG GCACCGTCAC CACATTCGAA
GGGGACATGG AAGAATACCG CGACCTGATT GTCTCCTCAG GTAAAAAAAA AGAAGAAAAA
ATTGACGTAA CCGTCGAAGC CGGGAAAAAA GCTGACCAGC GCAAGGCCAA TGCCGAAAAG
CGGGCCGCGC TGGCACCACT GAAGAAAAAG ATCAACGAAA TCGAATCATT GACCAAGAAA
CTGGAGACAG TGATTCAAGG TCTTGATGCA GAACTTTCAG ATCCGGTTCT CTACGAAAAG
CATCCCGCCA AGGCGGCGGA AAAGGTTAAG CAGCGTGGTG AGGCCGCCGC CAAGTTGAGC
GCTGCCGAGG AGCAATGGCT GGAGCTTTCA GCCGAATATG AAGAGGCGAT GGCGGGCTAG
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| Protein sequence | MPSRPSSAKT PAMITINDVS ARIAGRLLID HASISLPTGT KAGLVGRNGA GKSTLFRVIT
GDLGAESGSV SIPKNAKIGQ VAQEAPGTED SLIEIVLAAD KERTALMAEA ETATDPNRIA
DIQMRLVDID AHSAEARASS ILAGLGFNQE AQLRPASAFS GGWRMRVALA SVLFAEPDLL
LLDEPTNYLD LEGTLWLEDY IRRYPHTVII ISHDRDLLNN AVNAIVHLDQ KKLTFYRGGY
DQFERQKAEN DELQMKSKAK SDAARKHLQA FIDRFKAKAS KAKQAQSRVK ALERMGTVSA
VIEDHVQPIT FPEPEKQPAS PIIAINGGSV GYEPGKPILK NLNLRIDADD RIALLGSNGN
GKSTFAKFIS GRLPPESGDL RLAPSLKIGF FAQHQLDDLV PEDTPVEHVR RLMPQAPEAK
VRARVAQMGL ATEKMATAAK DLSGGEKARL LMGLAAFHAP NLLILDEPTN HLDIDSRRAL
IEALNDYDGA VILISHDRHL IEATVDRLWL VNNGTVTTFE GDMEEYRDLI VSSGKKKEEK
IDVTVEAGKK ADQRKANAEK RAALAPLKKK INEIESLTKK LETVIQGLDA ELSDPVLYEK
HPAKAAEKVK QRGEAAAKLS AAEEQWLELS AEYEEAMAG
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