| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1543 |
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| Symbol | |
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| ID | 7387356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1292016 |
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| End bp | 1293215 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650905 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549110 |
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| Protein GI | 222148153 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGGAT CCGGCATGAA GCTTCTTGAG TCCTATATAT TGCGGCGTGT CGCGCAGATG
TTCCTGACGG CACTTCTGCC CGTGCTGGCG ATCATCTGGA CAACACAGGT CCTGGCACGC
ATCAATCTCG TGACCGATAC CGGACAGTCG ATCGGCTCTT TTGCCACGCT CGCCACCCTC
ATCCTGCCCA CCATCATTCC CATCGTCATG CCGTTTGCGC TGGTTATTGG CATTACGCAG
AGCCTGACGG CGATGAACAA CGATTCCGAG CTGGCCGTCA TCGACGCCGC CGGTGCGTCT
CGTGCGGTTA TTCTCCGGCC AATCCTGCTG TTTGCGCTGG CCATCAGCGT GATAACGCTT
GTTATCACCA ACGAAGTGCA GCCAAAAGTG AAAGTGGCGG CGCGTCAGAT GATTGCCAAT
GCCTATGCCG ACCTTCTCTC GACGGTGATC GAGGAAAAAA CCTTCCGCAA GGTGGAAGAC
GGCCTTTATG TGCAGATTTC CCAGCGATTG GCGGGACGCG TGCTGAAAGG CCTGTTCGTC
GCCGATTACC GCGACCCGGC CTATTCGCTG ATCTATTATG CCCGCGAAGG CGCGGTGGAT
GAGACCGGGA CCGCGCTGAT CATGCATGAC GGTGAGGTCC AGCGCAAAGC ACCGGGTGGC
ACGGTTTCGA TCGTGCGGTT CGATTCCTAT GCCTTCGACC TGTCCGACCT GACGGAAACC
CGTGGCAAGG CAAAGATGCG GCCGAGTGAC CGCAGCCTGA GCTTCCTGCT CAATCCGGAT
ACAAATGACG ACGATTACAA GGATCACCCA GGCGAATATC GGGCGGAACT GCATAAGCGC
ATGACAGAAT GGCTCCTGCC CTTTGCTTTC GCGCTGATTT CACTGGCCAT CGCCGGCGAT
GCGCGCTCCC ACCGAGAGGC ACGGCTGCAT CCTATGGTCT CGGCATTGAC CCTTGCGCTT
GTTCTGCGCT GGCTGACATT CTATGCCGCC AACAAGTCCG AATCGAATGC CGCCTTCATC
GTGTTAATGT ATGCGACACC GCTCGCCAGC GCGGCGATTG CCACCCTGAT GCTGATGCGG
CAGAAGAAAT CGCAATTGCC AGCACCCTTG CGTCGTATGA TCGACACGAC ACGGTTGGCC
TTTCAGCGGC GTTTTAGCTC CAATAGCGCC AATGGCCAGG ACAATGGAGG CAGCGCATGA
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| Protein sequence | MAGSGMKLLE SYILRRVAQM FLTALLPVLA IIWTTQVLAR INLVTDTGQS IGSFATLATL
ILPTIIPIVM PFALVIGITQ SLTAMNNDSE LAVIDAAGAS RAVILRPILL FALAISVITL
VITNEVQPKV KVAARQMIAN AYADLLSTVI EEKTFRKVED GLYVQISQRL AGRVLKGLFV
ADYRDPAYSL IYYAREGAVD ETGTALIMHD GEVQRKAPGG TVSIVRFDSY AFDLSDLTET
RGKAKMRPSD RSLSFLLNPD TNDDDYKDHP GEYRAELHKR MTEWLLPFAF ALISLAIAGD
ARSHREARLH PMVSALTLAL VLRWLTFYAA NKSESNAAFI VLMYATPLAS AAIATLMLMR
QKKSQLPAPL RRMIDTTRLA FQRRFSSNSA NGQDNGGSA
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