| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1537 |
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| Symbol | ksgA |
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| ID | 7386492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1285222 |
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| End bp | 1286049 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650900 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_002549105 |
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| Protein GI | 222148148 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.22522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCTC TGGACGGATT GCCGCCGCTG CGCGACGTTA TCCAGCGCCA TGGGCTGGAT
GCAAAGAAAG CACTCGGCCA GAATTTTCTG CTGGACCTCA ATATCACCCA GAAAGTCGCC
CGCACCGCCG GTGACCTGAC GAATGCGACG GTGTTCGAGG TCGGCCCAGG CCCAGGCGGC
CTGACGCGGG CCTTGCTGGC GCTGGGTGCC AAGAAGGTTA TCGCCATAGA GCGCGACAGC
CGCTGCCTGC CGGCGCTGGC CGAGATTTCC GACCATTATC CCGGCCGCCT CGAGGTGATC
GAGGGCGATG CCCTGAAGAC TGACTTTGAG GCCATGGCCC CGGATGGTCC GGTGAAAATC
GTTGCCAACC TGCCCTATAA TGTCGGCACG CAATTGCTGA TCAACTGGCT GATGCCACGC
CAATGGCCAC CCTTCTGGGA TTCGTTGACG CTGATGTTCC AGAAGGAAGT CGGCCAGCGG
ATTGTGGCAG AAGCTGACGA CGACCATTAT GGCCGTCTCG GTGTACTCTG CGGCTGGCGG
ACTGAGGCCC ATATGGCGTT CGACCTGTCG CCACAGGCCT TTACACCACC GCCGAAAGTG
ACATCCACAG TGGTGCATCT CACGCCGCGC CCTGCCCCCA TTCCGTGCGA GATCGCCAAG
CTGGAAAAAC TGACCCAGGC CGCTTTTGGC CAGCGGCGCA AGATGCTGCG TGCAAGCCTG
AAGCCCCTGG GTGGTGAAGC GCTTCTGAAC CGCGCCGAAA TCGATCCATC GCGCCGGGCA
GAAACCCTGT CGGTCGAGGA ATTCTGCCGG ATTGCCAATC TGCTGTAG
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| Protein sequence | MAALDGLPPL RDVIQRHGLD AKKALGQNFL LDLNITQKVA RTAGDLTNAT VFEVGPGPGG
LTRALLALGA KKVIAIERDS RCLPALAEIS DHYPGRLEVI EGDALKTDFE AMAPDGPVKI
VANLPYNVGT QLLINWLMPR QWPPFWDSLT LMFQKEVGQR IVAEADDDHY GRLGVLCGWR
TEAHMAFDLS PQAFTPPPKV TSTVVHLTPR PAPIPCEIAK LEKLTQAAFG QRRKMLRASL
KPLGGEALLN RAEIDPSRRA ETLSVEEFCR IANLL
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