| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1534 |
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| Symbol | |
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| ID | 7386489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1282888 |
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| End bp | 1283778 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650897 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549102 |
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| Protein GI | 222148145 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1561] Uncharacterized stress-induced protein |
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| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0415329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGC AATCCATGAC CGGGTTCGCC CGCAATGAAG GTCAGATCGG CCGCTATCGT
TTTGCCTGGG AGCTGCGTTC GGTCAATGGC AAGGGGCTGG ATGTGCGGCT TCGTCTGCCG
CCGGGCCTGG AAGACATGGA AACCGACGTC AAGGCGGCGG TCGCCTTGCT GCTGTCTCGC
GGCAATGTGC AGGTTGGCCT GAGCCTGACG GCCAGCGACA ACCGCATGGA AGCGGTGGTC
AACCGCGATG CGCTGGATGC CGTTCTGGAG TTGCGTGCTC AATTGGGGCC GGGCATCGTC
TCTGCCGAAC CATTGTCGCT CGACACGCTT TTGTCCATCC GTGGCCTTGT CGATCTGCGC
GAGGCGCAGG AGGACGGCAC ACAACTGGCT GCACGGCGGC AAATGCTGCT GGGCGAGCTG
CAAACCGCCG TCGCCGCACT TGCTGAGATG CGGTCGCACG AGGGCCTTGC CTTGCAGGCG
GTCCTGCTCG CACATATCGA TGAAATCGAG CGACTGGCCT TGGTCATCGA GGCTGATCCA
TCCCGCAGCC CGGACGAGAT CGCACGACGG CTGGCCACGC AGATCAGCGC GTTGCTGGCG
TCCGCGCCTG TTTTGGACAA GGACAGGCTT TACGCCGAGG CTGCCTTGAT GGCAACCAAG
GCCGATCTGC GCGAGGAGAT CGACCGGTTG AAGGCGCATG TGGCTGCAGC TCGGTCCCTG
CTGCGCGCTG GCGGTCCGGT CGGGCGCAAG CTTGATTTTC TGGCGCAGGA ATTTAATCGC
GAATCGAATA CCATCTGCTC CAAATCCAAT TCCGCCGCGG TTACGGCGGC CGGGATCGAA
TTGAAGGTCG TCATCGACCA GTTCCGCGAG CAGGTCCAAA ATCTGGAGTG A
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| Protein sequence | MTLQSMTGFA RNEGQIGRYR FAWELRSVNG KGLDVRLRLP PGLEDMETDV KAAVALLLSR
GNVQVGLSLT ASDNRMEAVV NRDALDAVLE LRAQLGPGIV SAEPLSLDTL LSIRGLVDLR
EAQEDGTQLA ARRQMLLGEL QTAVAALAEM RSHEGLALQA VLLAHIDEIE RLALVIEADP
SRSPDEIARR LATQISALLA SAPVLDKDRL YAEAALMATK ADLREEIDRL KAHVAAARSL
LRAGGPVGRK LDFLAQEFNR ESNTICSKSN SAAVTAAGIE LKVVIDQFRE QVQNLE
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