| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1532 |
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| Symbol | |
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| ID | 7386488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1281588 |
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| End bp | 1282832 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650896 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549101 |
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| Protein GI | 222148144 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0269325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGTGA GCGATCGCGT CGACCAGGAA GCCAACCGTT CCAGCAATGG TGGCGAACAG
CAGCCCCAAA ATCAAAACCA GGCGGCAAAA GGGCCTTTCA TCCCCAAATC GCCCTCGGAA
GCCCTGAGGC CGGAGCGGGT GCCGCAACCG CCGCGTCGTT CGCGGCGCGC GCGCAGCCAG
TTGGTGGTGT TCCTGAATTT CGTGATGACC TTGCTGGTCT TTGCCTGCAT TGCCGCAGTT
GCTGCCTTCT ATTACGTGGT CTCTGCGTTT CAGGACCCCG GTCCGCTCCC GACCAACGCC
AATTTTCTGG TTCGCAACGG CGCGGGCGTC TCCGAGATCT CCACCAGCCT TGAGCGCAAT
GGCATGATTT CCGATGCGCG GATTTTCCGT TACATGACAT CGACCTATCT GCATGACGGC
GATACGTTGA AGGCTGGCGA ATACGAGATC AAGGCCGGCG CCTCGATGAA GGATATTCTC
GAGCTGCTGC GGTCGGGCAA ATCCATTCTC TATTCGGTGA CGCTGCCGGA GGGTCTGACG
GTCAAGCAGA TGTTCGACCG GCTGGCCAAG GATGAGACGC TCGAAGGCGA TCTGCCCAAG
GCGCTGCCGC CTGAGGGAAG CCTGCGCCCG GATACCTATA AATTCACCCG GGGCACCAAG
CGGCAGGAGG TCGTCGATCA GATGCTCGAC GGACAGAAAC GTCTTGTCGA TCAGATCTGG
GCCAATCGTT CCCCCGACCT GTCCTTGAAG ACCAAGGAGC AATTCGTGGT TCTGGCTTCC
ATTGTCGAAA AGGAAACCGG CAAGGATGAT GAGCGGGCCC ATGTGGCCTC GGTGTTCCTC
AACCGGCTGC AGAAGGGCAT GCGGCTGCAA TCGGACCCGA CCATCGTTTA CGGGTTGTTC
GGCGGTGACG GCAAACCTGC TGACCGGCCG ATCTACCAGT CGGACCTGCA GAAGCAGACG
CCCTATAATA CCTATGTGAT CAAGGGCCTG CCGCCGGGAC CGATTGCCAA TCCAGGCCGC
GCGGCGCTGG AGGCGGTTGC CAATCCCTGG CGCACCTCCG ATCTGTATTT CGTCGCAGAT
GGCACTGGCG GTCACGTCTT TGCATCGACC CTCGATGAGC ATAATGCCAA TGTCAGACGT
TGGCGCAAGC TGGAGGCGGA TCGGGGTGCA GATCCGGGTC AAGCTGTCGA TGGCCAGCCC
GAAGCGGATC CTGATCAGGC TCCAAAGCCG GCGAAGAAAA AATAA
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| Protein sequence | MPVSDRVDQE ANRSSNGGEQ QPQNQNQAAK GPFIPKSPSE ALRPERVPQP PRRSRRARSQ
LVVFLNFVMT LLVFACIAAV AAFYYVVSAF QDPGPLPTNA NFLVRNGAGV SEISTSLERN
GMISDARIFR YMTSTYLHDG DTLKAGEYEI KAGASMKDIL ELLRSGKSIL YSVTLPEGLT
VKQMFDRLAK DETLEGDLPK ALPPEGSLRP DTYKFTRGTK RQEVVDQMLD GQKRLVDQIW
ANRSPDLSLK TKEQFVVLAS IVEKETGKDD ERAHVASVFL NRLQKGMRLQ SDPTIVYGLF
GGDGKPADRP IYQSDLQKQT PYNTYVIKGL PPGPIANPGR AALEAVANPW RTSDLYFVAD
GTGGHVFAST LDEHNANVRR WRKLEADRGA DPGQAVDGQP EADPDQAPKP AKKK
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