| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1531 |
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| Symbol | fabF |
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| ID | 7386487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1279992 |
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| End bp | 1281254 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650895 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
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| Protein accession | YP_002549100 |
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| Protein GI | 222148143 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.227032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGTG TCGTTATCAC CGGTACCGGC ATGGTATCTC CTCTTGGCTG CGGTACGGAC
GTCACCTGGA CGCGGCTTCT TGCCGGCCAG AACGCTGCCC GCAAGGTAAC CGAATTCGAG
GTCGAGGATC TTCCGGCCAA GATCGCGTGC CGCCTTCCCT TTGGCGACGG TACAGACGGC
ACATTCAATG CCGATGACTG GATGGAGCCG AAGGAACAGC GCAAGGTCGA TCCTTTTATC
GTTTATGCGA TGGCCGCCGC TGAAATGGCA TTGGCCGATG CTGACTGGAA GCCTCAGACC
GACGAGGACC AGATTGCTAC CGGCGTGCTG ATCGGTTCGG GTATTGGTGG CATCGAAGGC
ATTGTCGAAG CCGGCTATAC GCTGCGCGAC AAAGGTCCGC GCCGTATTTC CCCCTTCTTC
ATTCCTGGCC GTCTGATCAA CTTGGCCTCC GGTCATGTTT CCATCCGCCA CAAGCTGCGC
GGTCCGAACC ACTCCGTGGT CACCGCCTGT TCGACGGGCG CCCATGCTAT CGGCGATGCC
AGCCGGTTCA TCGCTTTCGG CGATGCCGAC GTGATGGTGG CCGGTGGTGC TGAATCGCCG
ATCAGCCGGA TTTCGCTGGC CGGTTTTGCC GCCTGCAAGG CCCTGTCCAC CCAGCATAAC
GACGATCCGC AAAAGGCTTC GCGCCCCTAT GACAGAGACC GCGACGGTTT CGTGATGGGC
GAGGGCGCCG GGATCGTGGT GCTTGAGGAG TTGGAACATG CCAAGGCGCG TGGTGCGAAG
ATCTATGCCG AAGTGGTGGG CTATGGCCTG TCCGGCGATG CATTCCATAT CACGGCACCT
GCGGAAGACG GCGATGGCGC ATTCCGGTGC ATGACCATGG CGCTGAAGCG CGCTGGGATG
ACGGCTGCCG ATATCGACTA TATCAATGCC CATGGCACAT CGACCATGGC CGATACGATT
GAGCTTGGCG CTGTTGAGCG GCTGGTCGGT GCGTCCGCCT CGAAGATTTC GATGTCGTCG
ACCAAATCGG CGATCGGGCA TCTTCTGGGG GCAGCCGGTG CGGTCGAAGC GATCTTCTCG
GCGCTTGCCA TTCGGGACGG CATCGTTCCA CCGACGCTGA ACCTCGATAC GCCGGATGTG
GACAGTGCCA TTGACCTCGT GCCGCATCAG GCCCGAAAGC GCGATGTGCG GGTGGCCCTG
TCGAATTCCT TCGGGTTCGG TGGCACCAAT GCATCGCTGG TGCTGCGCCG CTTCGAAGGC
TAG
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| Protein sequence | MRRVVITGTG MVSPLGCGTD VTWTRLLAGQ NAARKVTEFE VEDLPAKIAC RLPFGDGTDG
TFNADDWMEP KEQRKVDPFI VYAMAAAEMA LADADWKPQT DEDQIATGVL IGSGIGGIEG
IVEAGYTLRD KGPRRISPFF IPGRLINLAS GHVSIRHKLR GPNHSVVTAC STGAHAIGDA
SRFIAFGDAD VMVAGGAESP ISRISLAGFA ACKALSTQHN DDPQKASRPY DRDRDGFVMG
EGAGIVVLEE LEHAKARGAK IYAEVVGYGL SGDAFHITAP AEDGDGAFRC MTMALKRAGM
TAADIDYINA HGTSTMADTI ELGAVERLVG ASASKISMSS TKSAIGHLLG AAGAVEAIFS
ALAIRDGIVP PTLNLDTPDV DSAIDLVPHQ ARKRDVRVAL SNSFGFGGTN ASLVLRRFEG
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