Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1520 |
Symbol | rpsF |
ID | 7386480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1272775 |
End bp | 1273236 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650888 |
Product | 30S ribosomal protein S6 |
Protein accession | YP_002549093 |
Protein GI | 222148136 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0360] Ribosomal protein S6 |
TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.162884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTTT ATGAACATGT ATTCCTTGCC CGGCAGGATA TGTCCGCACA GCAGGTTGAT GCCCTCGTAG AACAGTACAA GGGTGTTATC GAAGCAAATG GCGGCAAAGT CGGGCGCGTA GAAAACTGGG GCCTGAAGTC CCTGACCTAC CGCATCAACA AGAACCGCAA GGCTCACTAC GCTCTGATGG ACATCGATGC TCCGGCTGCT GCCGTGCACG AAGTCGAGCG TCAGATGCGC ATCAACGAAG ACGTTCTTCG TTACATGACC ATCGCCGTTG AAGCCCACGA AGAAGGCCCG TCTGCCATGA TGCAGAAGCG CGACCGCGAC GACCGTCCGC GCCGCGATGG CGACCGTCCG GATCGTGGCG ACCGCGGTGA TCGTGGTGAT CGTGGTCCCC GTGAAGGTGG CCGTGAAAGC TTTGGTGATC GTCCGCGCCG TCCGCGCGAA GATCGCGCAT AA
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Protein sequence | MALYEHVFLA RQDMSAQQVD ALVEQYKGVI EANGGKVGRV ENWGLKSLTY RINKNRKAHY ALMDIDAPAA AVHEVERQMR INEDVLRYMT IAVEAHEEGP SAMMQKRDRD DRPRRDGDRP DRGDRGDRGD RGPREGGRES FGDRPRRPRE DRA
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