| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1519 |
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| Symbol | rpsR |
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| ID | 7386479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1272514 |
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| End bp | 1272762 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650887 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_002549092 |
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| Protein GI | 222148135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.114713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG TTTCCTCTTC CACGGTTCGT CGTCCGTTCC ATCGCCGTCG CAAGACCTGC
CCCTTCTCCG GCGCCAACGC TCCGAAGATC GACTACAAGG ACGTGCGTCT GCTGCAGCGC
TACATTTCCG AGCGCGGCAA GATCGTTCCT TCGCGGATCA CGGCTGTTTC GCAGAAGAAG
CAGCGCGAGC TGGCCAAGGC CATCAAGCGC GCCCGCTTCC TCGGCCTGCT GCCTTACGTT
GTTGCTTAA
|
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| Protein sequence | MAEVSSSTVR RPFHRRRKTC PFSGANAPKI DYKDVRLLQR YISERGKIVP SRITAVSQKK
QRELAKAIKR ARFLGLLPYV VA
|
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