| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1513 |
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| Symbol | |
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| ID | 7386475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1268051 |
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| End bp | 1268833 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650883 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002549088 |
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| Protein GI | 222148131 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.522367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGTC GTACCCTGCT TGCCCTTGGC CTTTCCCTTG CCACCTTTGC CGCCGTCCTG
CCGGCCCATG CCGATGCGCT GGGCGACATT ACCAAGCGGG GTACGCTGAA AGTGGCGGTG
CCGCAGGACT TTCCGCCATT CGGCAGCGTC GGCACCGACA TGCAGCCCGT CGGATATGAC
ATCGATACCG CAGCGCTGAT TGCCAAGAAA TTGGGCGTCA AGCTGGAACT GGTGCCGGTC
ACCAGCGCCA ACCGCATTCC CTATTTGCAG ACCAACAAGG TTGATCTGGT CATTTCAAGC
CTCGGCAAGA ATCCAGACCG TGAAAAGGTC GTGGACTTCT CCACCGCCTA TGCGCCTTTC
TATAATGGCG TGTTTGCGCC CGCAGATACC GCCATCAAGT CCGCCGCCGA TCTGTCGGGC
AAGTCGGTCG GCGTTACCCG TGGCGCGGTC GAGGATCTGG AACTGACCAA GGTTGCGCCG
TCCGACGCTG TCATCAAGCG CTACGAGGAC AATAACGGCA CGATTTCCGC CTTCCTCTCC
GGTCAGGTCG ATGCGGTTGC CACCGGCAAT GTCGTCGCTG CTGCGATCCT CGCCAAAAAC
CCGCCGAAGC GTCCGGAGCC AAAGTTCCTG ATCAAGAACT CGCCCTGCTT CATCGGCTTC
AACAAGAACG AACCGGCGCT GGCGGAAAAG ATCAATGCGA TTATCGCCGA GGCCAAGGCC
GATGGCTCGC TGAGCAAGAT TTCCGAAAAA TGGCTGGGCG CACCGCTTCC TGCCGATCTG
TAA
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| Protein sequence | MHRRTLLALG LSLATFAAVL PAHADALGDI TKRGTLKVAV PQDFPPFGSV GTDMQPVGYD
IDTAALIAKK LGVKLELVPV TSANRIPYLQ TNKVDLVISS LGKNPDREKV VDFSTAYAPF
YNGVFAPADT AIKSAADLSG KSVGVTRGAV EDLELTKVAP SDAVIKRYED NNGTISAFLS
GQVDAVATGN VVAAAILAKN PPKRPEPKFL IKNSPCFIGF NKNEPALAEK INAIIAEAKA
DGSLSKISEK WLGAPLPADL
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