| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1512 |
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| Symbol | |
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| ID | 7386474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1267259 |
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| End bp | 1267930 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650882 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002549087 |
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| Protein GI | 222148130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.438204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATTATA TTTTCGATTT CAGCTGGTTT GGCGAATATT ACCCGATCAT CCTCAAAGGG
GTCGGGGTGA CGGTCGAACT GACACTGGTC GGTGGCGTGG TCGGCATTGC CTTCGGCATC
GCCTGCGCCT GGGCGCGGGC CTTGGGACCG AAATGGATCA AGCCACCAGT TGCCGCCTAT
GTGGAACTGA TCCGCAATAC GCCCTTCCTG ATCCAGCTGT TCTTCATCTT TTTCGGCCTG
CCCTCCACCG GGCTGAAGCT CTCCGAGATG GAAGCCGCCA ATCTGGCGAT GATCATCAAT
CTCGGCGCCT ATAGCTGCGA GATCATCCGA GCCGGGATCG AGGCAACCCC AAAAGGCCAG
TTCGAGGCCG GGACTGCGCT GGCGCTTCGC CCGCTGCAAA CCTTCCGGCT GATCATTCTG
GTTCCGGCTC TGCAACGAAT CTGGCCGGCG CTATCGTCTC AATTGGTCAT CGTCATGCTC
GGTTCCGCCG TGGTGTCGCA GATTGCCACT GAGGACCTGA CCTTTGCCGC CAATTTCATC
CAGTCGCGCA CCTTCCGCGC ATTTGAAGCC TACATGATCT CCACTGCTCT CTATCTGTTG
CTGGCCATCG GCCTTCGACA ATTGCTGGCG CTGCTCGGTA GGCAGATCTT CCCGAAAGGG
GCGACACGAT GA
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| Protein sequence | MHYIFDFSWF GEYYPIILKG VGVTVELTLV GGVVGIAFGI ACAWARALGP KWIKPPVAAY
VELIRNTPFL IQLFFIFFGL PSTGLKLSEM EAANLAMIIN LGAYSCEIIR AGIEATPKGQ
FEAGTALALR PLQTFRLIIL VPALQRIWPA LSSQLVIVML GSAVVSQIAT EDLTFAANFI
QSRTFRAFEA YMISTALYLL LAIGLRQLLA LLGRQIFPKG ATR
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