| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1502 |
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| Symbol | ugdH |
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| ID | 7386467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1259427 |
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| End bp | 1260743 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650875 |
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| Product | UDP-glucose 6-dehydrogenase |
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| Protein accession | YP_002549080 |
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| Protein GI | 222148123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.842125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTC GCATTACCAT GGTAGGCACC GGCTATGTGG GCCTGGTCAG CGGTGCATGC
TTTGCCGAGC TGGGCCATGA CGTCATCTGC GTCGATAAGG ACCCGCGCAA GATCGAAATG
CTGCATCAAG GCAAGATGCC GATCTATGAG CCGGGTTTGG ATGAACTGGT TCAGCGCAAT
GTGGCAGCCG GGCGCATCAC CTTCACCACC GACCTTGCCG CAAGCGTCAA GGACCGCGAT
GCCGTGTTCA TCGCCGTCGG CACACCAACC GAGGCGGGCT CGGACCGGGC CGATCTGAAA
TATGTGTTTG CCGCCGCTGC CGAAATTGCC AAGGCCGTCA CCGGCTTTAC GGTCATCGTC
ACCAAATCGA CAGTGCCGGT TGGCACCAAC CGTCAGGTGT TTGACATCGC CAAGGCCAAT
GCCGCCCCGG ATGTGCGGAT CGCGGTTGCG TCCAATCCCG AATTTCTGCG CGAAGGCGCC
GCCATCAAGG ATTTTCTGGA GCCGGACCGG ATCGTCGTCG GCGTCGATAC CCCTCAGTCT
GGCGAGGTGA TGGAACGGAT TTATGCGCCG CTGCTGCTAA ACGGTAATGT TCCTTTCTTC
AGCACCGGGA TTGAGACGGC TGAACTGATC AAATATGCCG CCAATGCCTT TCTCGCGGTC
AAGATCAGCT TTATCAATGA AATGGCCAAT CTATGCGAGG CCGTCGGCGC CACAGTTGAG
GATGTGGCGC ATGGCATCGG TCTCGACAAG CGGATCGGCC GGGCCTTTCT CAATACCGGC
CCTGGCTGGG GCGGCTCCTG CTTTCCCAAG GATACCCGCG CGTTGCTGGC AACCGCTGCC
GATGCCGGGA TCGACTCGCT CGTCGTGTCT TCGGCGGTCA ATGCCAACAA CCAGCGCAAG
GCCGATATGG TCACCAAGGT GATTGAGGCC GCGGGCGGTG ATGTCGAGGG CAAGAAAATC
GCCGTATTGG GCGTGACCTT CAAAGGCCAG ACCGACGATA TGCGCGAAAG CACCAGCCTG
GTGATGCTGC CTGCCTTGCA GGCGAAAGGC GCAAAGGTTG CTGCTTTCGA TCCGTCAAGC
CCACATGACG CGGCAAGTCA GTTGCCGGGT GTTGAAATGA CCAAGACAGC CAAGGAAGCC
GCGACCGGCG CCGATGTTCT GGTCATCCTG ACCGACTGGA TGGTCTTCAA GACCTATAAT
TTCAAGGAAA TCGCCAGTGT CATGGCGTCT CCTGTGCTGG TCGATCTTCG CAATATGTTC
AATGCCAATG AAGCGCAGAA GAATGGATTT TCTCACTATG TCTCGCTGGG ACGGTGA
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| Protein sequence | MNVRITMVGT GYVGLVSGAC FAELGHDVIC VDKDPRKIEM LHQGKMPIYE PGLDELVQRN
VAAGRITFTT DLAASVKDRD AVFIAVGTPT EAGSDRADLK YVFAAAAEIA KAVTGFTVIV
TKSTVPVGTN RQVFDIAKAN AAPDVRIAVA SNPEFLREGA AIKDFLEPDR IVVGVDTPQS
GEVMERIYAP LLLNGNVPFF STGIETAELI KYAANAFLAV KISFINEMAN LCEAVGATVE
DVAHGIGLDK RIGRAFLNTG PGWGGSCFPK DTRALLATAA DAGIDSLVVS SAVNANNQRK
ADMVTKVIEA AGGDVEGKKI AVLGVTFKGQ TDDMRESTSL VMLPALQAKG AKVAAFDPSS
PHDAASQLPG VEMTKTAKEA ATGADVLVIL TDWMVFKTYN FKEIASVMAS PVLVDLRNMF
NANEAQKNGF SHYVSLGR
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