| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1499 |
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| Symbol | purF |
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| ID | 7386465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1256927 |
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| End bp | 1258516 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650873 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_002549078 |
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| Protein GI | 222148121 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.338535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA CCCGTGATGG AAATCGGCGC TCCTTACTGC ATTTCGTCAC CCGTGCCCCG
TATCGGCGCG CATGTATCGA GCAAAGGCTT GCTGCAATGA AACAGTCTAT TTCCTCGACT
TTCCTTGAAG ACCTCGATGG CGACACGCTG CATGAAGAAT GCGGCGTGTT CGGCATTCTG
GGCCATCAGG ATGCCGCAAC CCTGACCGCT CTCGGACTGC ATGCGCTTCA GCATCGTGGC
CAGGAGGCAG CCGGACTGGT TTCCTTTGAC GGCAAGCAGT TTCACACCGA AAAGCATATG
GGCCTTGTCG GCGACCACTA TACCAATCCA GTGACGCTGG CAAAATTGCC GGGTTCCGCC
GCCATCGGCC ATACCCGCTA TTCCACCACT GGCGAAGTGG CGTTGCGCAA TGTGCAGCCA
CTGTTTGCCG AATTGGAGGA AGGCGGCATC GCCATTGCCC ATAACGGCAA TTTCACCAAT
GGCCTGACGC TGCGCCGCCA GATCATTGCC ACCGGGGCCA TCTGTCAATC GACCTCGGAT
ACCGAAGTCG TGCTGCATCT GATCGCCCGC TCCCGTCACA GCTCCACCGC CGACCGCTTC
ATCGATGCCA TCAGGCAGAT GGAAGGTGGT TATTCGATGC TGGCGATGAC CCGCACCAAA
CTGATCGCCG CCCGCGACCC GATCGGCATC CGGCCTCTGG TGATGGGCGA TCTCGACGGC
AAGCCGATTT TTTGTTCGGA AACCTGCGCA CTCGACATTA TCGGCGCGAA ATTCGTCCGT
GATGTTGAAA ATGGCGAAGT GATCATCTGC GAGATCCAGC CGGATGGCTC GATCACCATC
GACAGCCGCC GTCCAGCACG CCCGCAGGCC GAGCGTCCCT GCCTGTTCGA ATATGTCTAT
TTCGCCCGCC CCGATTCGGT CGTCAGCGGT CGCAACGTCT ATCAGACCCG CAAGGCCATG
GGCATGAACC TGGCGAAGGA AGCCCCTTGC GATGGCGATG TCGTGGTGCC TGTTCCAGAT
GGCGGCACGC CGGCTGCACT GGGCTATGCC CAGGCCAGCG GCATTCCGTT CGAATACGGC
ATCATCCGCA ATCACTATGT CGGACGCACC TTTATCGAGC CGACGCAGCA GATCCGCGCC
TTCGGCGTCA AGCTGAAGCA TTCGGCCAAC CGGGCGATGA TCGAGGGTAA GCGAGTTGTC
CTGGTGGACG ATTCCATCGT GCGCGGCACG ACATCGCTGA AGATCGTCCA GATGATCCGC
GATGCCGGAG CCAAGGAAGT GCATATCCGT GTTGCCAGCC CGATGATCTA CCATCCGGAT
TTCTACGGCA TCGACACGCC GGATGCCGAA AAGCTGCTCG CCAATCAATA TGCGGGCGCC
GAAGCCATGG CGAAATTTAT CGGCGCCGAT TCGCTTGCCT TCCTGTCCAT CGATGGGCTG
TACATGGCCG TAGGCGGCGA GGCCCGCAAT GCCGCCAATC CGCAATTTAC CGATCACTAT
TTCACCGGCG ACTACCCGAC CCGTCTCCTG GACAAGGAAG GCGAGAAAAT GGGCGGCCGC
AAGGTGTCGG TTATGTCTAT CAACGGCTGA
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| Protein sequence | MSATRDGNRR SLLHFVTRAP YRRACIEQRL AAMKQSISST FLEDLDGDTL HEECGVFGIL
GHQDAATLTA LGLHALQHRG QEAAGLVSFD GKQFHTEKHM GLVGDHYTNP VTLAKLPGSA
AIGHTRYSTT GEVALRNVQP LFAELEEGGI AIAHNGNFTN GLTLRRQIIA TGAICQSTSD
TEVVLHLIAR SRHSSTADRF IDAIRQMEGG YSMLAMTRTK LIAARDPIGI RPLVMGDLDG
KPIFCSETCA LDIIGAKFVR DVENGEVIIC EIQPDGSITI DSRRPARPQA ERPCLFEYVY
FARPDSVVSG RNVYQTRKAM GMNLAKEAPC DGDVVVPVPD GGTPAALGYA QASGIPFEYG
IIRNHYVGRT FIEPTQQIRA FGVKLKHSAN RAMIEGKRVV LVDDSIVRGT TSLKIVQMIR
DAGAKEVHIR VASPMIYHPD FYGIDTPDAE KLLANQYAGA EAMAKFIGAD SLAFLSIDGL
YMAVGGEARN AANPQFTDHY FTGDYPTRLL DKEGEKMGGR KVSVMSING
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