Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1497 |
Symbol | |
ID | 7386464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1256142 |
End bp | 1256882 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643650872 |
Product | NAD/NADP dependent oxidoreductase |
Protein accession | YP_002549077 |
Protein GI | 222148120 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.445063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTTG ATCTCAAGGG ACGGATCGCG CTGGTCACCG GAGCGTCACG CGGCATCGGC TATTTCACCG CCCTTGAACT GGCAAAGGCA GGCGCGCATG TGATTGCCTG CGCCCGCACC GTCGGGGGTC TGGAAGACCT TGATGACGCC ATTACCTCGG CAGGTGGTAG CGCGACCCTG GTGCCGTTCG ATCTCGCCGA CATGGGCGCC ATCGATGCGC TGGGCGGATC GATTTTCGAG CGCTGGGGCA AGCTGGATAT TCTGGTTGCC AATGCTGGCG TGCTCGGGAC GATTTCGCCC GTTGCCCATG TCGAGGCCAA GGTATTCGAA AAGGTGATGA CCATCAATGT CACCGCCACC TGGCGGCTGA TCCGCTCGAT CGATCCGCTG ATCACCAAAT CCGACCAGGG CCGTGCCCTG ATCCTGTCCT CCGCCGCACC GCATAAATGC AAGCCTTTCT GGGGCCCCTA TTCCGCATCC AAGGCTGCGG TTGAAGCCTT AGCCCGCACC TGGGCTGCCG AAAACCAGCG CCTACCGCTC CGCGTCCTTT CCATTGACCC TGGTGCCACC CGCACGGCGA TGCGCGCCCA GGCCATGCCG GGCGAAGACC CTGATACATT GCCGCATCCC TCAGAAGTCG CCAAAGCCCT GTTGCCACTG GTCGGGCCGC AACAGACGGA AACAGGCAAG CTGTTTATCG TCCGGGAACA GAAGATCGTC GATTATCCGC CCTACAGCTG A
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Protein sequence | MTVDLKGRIA LVTGASRGIG YFTALELAKA GAHVIACART VGGLEDLDDA ITSAGGSATL VPFDLADMGA IDALGGSIFE RWGKLDILVA NAGVLGTISP VAHVEAKVFE KVMTINVTAT WRLIRSIDPL ITKSDQGRAL ILSSAAPHKC KPFWGPYSAS KAAVEALART WAAENQRLPL RVLSIDPGAT RTAMRAQAMP GEDPDTLPHP SEVAKALLPL VGPQQTETGK LFIVREQKIV DYPPYS
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