Gene Avi_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1497 
Symbol 
ID7386464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1256142 
End bp1256882 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content62% 
IMG OID643650872 
ProductNAD/NADP dependent oxidoreductase 
Protein accessionYP_002549077 
Protein GI222148120 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.445063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTG ATCTCAAGGG ACGGATCGCG CTGGTCACCG GAGCGTCACG CGGCATCGGC 
TATTTCACCG CCCTTGAACT GGCAAAGGCA GGCGCGCATG TGATTGCCTG CGCCCGCACC
GTCGGGGGTC TGGAAGACCT TGATGACGCC ATTACCTCGG CAGGTGGTAG CGCGACCCTG
GTGCCGTTCG ATCTCGCCGA CATGGGCGCC ATCGATGCGC TGGGCGGATC GATTTTCGAG
CGCTGGGGCA AGCTGGATAT TCTGGTTGCC AATGCTGGCG TGCTCGGGAC GATTTCGCCC
GTTGCCCATG TCGAGGCCAA GGTATTCGAA AAGGTGATGA CCATCAATGT CACCGCCACC
TGGCGGCTGA TCCGCTCGAT CGATCCGCTG ATCACCAAAT CCGACCAGGG CCGTGCCCTG
ATCCTGTCCT CCGCCGCACC GCATAAATGC AAGCCTTTCT GGGGCCCCTA TTCCGCATCC
AAGGCTGCGG TTGAAGCCTT AGCCCGCACC TGGGCTGCCG AAAACCAGCG CCTACCGCTC
CGCGTCCTTT CCATTGACCC TGGTGCCACC CGCACGGCGA TGCGCGCCCA GGCCATGCCG
GGCGAAGACC CTGATACATT GCCGCATCCC TCAGAAGTCG CCAAAGCCCT GTTGCCACTG
GTCGGGCCGC AACAGACGGA AACAGGCAAG CTGTTTATCG TCCGGGAACA GAAGATCGTC
GATTATCCGC CCTACAGCTG A
 
Protein sequence
MTVDLKGRIA LVTGASRGIG YFTALELAKA GAHVIACART VGGLEDLDDA ITSAGGSATL 
VPFDLADMGA IDALGGSIFE RWGKLDILVA NAGVLGTISP VAHVEAKVFE KVMTINVTAT
WRLIRSIDPL ITKSDQGRAL ILSSAAPHKC KPFWGPYSAS KAAVEALART WAAENQRLPL
RVLSIDPGAT RTAMRAQAMP GEDPDTLPHP SEVAKALLPL VGPQQTETGK LFIVREQKIV
DYPPYS