| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1491 |
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| Symbol | rffB |
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| ID | 7386459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1249926 |
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| End bp | 1250984 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650867 |
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| Product | dTDP-D-glucose-46-dehydratase |
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| Protein accession | YP_002549072 |
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| Protein GI | 222148115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.170996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTAC TTGTAACCGG CGGTGCCGGC TTTATCGGAT CGGCCGTTGT TCGCCATCTG
GTGCTTGAAA AAGGCTATGA CGTCCTGAAT GTCGATAAGC TGACCTATGC GGGTACCTTG
ACCTCGCTGA AATCGGTTGA GGCAAATCCG CTTTACCGGT TCCTTCAGGC CGATATCTGC
GACGGCCAGG CGATTGCCTC GGCTTTTGCA AGCTTCAAGC CTGATCGTGT CATGCATCTG
GCCGCCGAAA GCCATGTGGA TCGCTCGATT ACCGGTGCCA AGGATTTCGT CGAGACCAAT
GTGCTCGGCA CGTTCACCAT GCTGGAATGC GCCCGGGCCT ATTGGCAGGG GCTGGAAGGT
GCGAGCAAGG ACGGTTTCCG CTTCCTGCAT GTCTCGACCG ACGAAGTCTA TGGTTCGCTG
GGCGATGAAG GTCTGTTTAC CGAAACCACC CCTTATGATC CAAGCTCTCC TTATTCGGCC
TCGAAAGCGG CTTCCGACCA TCTCGCCAAG GCCTGGGCGC GCACCTACGG CCTGCCGGTG
GTGGTGTCGA ATTGCTCCAA CAATTACGGC CCCTTCCATT TCCCGGAAAA GCTCATTCCG
CTGATGATCA TCAACGCGAT GGAAGGCAAG CCTCTGCCGG TTTACGGTAA TGGCGCCAAT
ATCCGTGATT GGCTTTACGT CGAAGACCAT GCCAGGGCGC TTGATATCAT CGCCGAGCGT
GGACAGATTG GCGAAACCTA TAATGTCGGC GGACGCAATG AGCGACGCAA TATCGACGTC
GTCACCCGCG TCTGCGCGCT GATGGATGAA TTGCATCCGT CGGGTACACC GCATGAGAAG
CTGATCCAAT ATGTGACCGA CCGCCCCGGC CACGACGCCC GTTATGCCAT CGACGCGACG
CGGCTGGAAA CCGAACTCGG CTGGAAGGCT CAGGAAAATT TCGAGACCGG CATCGAGAAA
ACCGTGAAAT GGTATCTCGA AAACCGCTGG TGGTGGGAGC CGTTGCGCCA GGGCTATGAC
GGTAGCCGTC TTGGCCTGCT GAAAGCCGCG AGCAAATGA
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| Protein sequence | MRVLVTGGAG FIGSAVVRHL VLEKGYDVLN VDKLTYAGTL TSLKSVEANP LYRFLQADIC
DGQAIASAFA SFKPDRVMHL AAESHVDRSI TGAKDFVETN VLGTFTMLEC ARAYWQGLEG
ASKDGFRFLH VSTDEVYGSL GDEGLFTETT PYDPSSPYSA SKAASDHLAK AWARTYGLPV
VVSNCSNNYG PFHFPEKLIP LMIINAMEGK PLPVYGNGAN IRDWLYVEDH ARALDIIAER
GQIGETYNVG GRNERRNIDV VTRVCALMDE LHPSGTPHEK LIQYVTDRPG HDARYAIDAT
RLETELGWKA QENFETGIEK TVKWYLENRW WWEPLRQGYD GSRLGLLKAA SK
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