| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1485 |
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| Symbol | |
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| ID | 7386454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1244649 |
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| End bp | 1244894 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643650862 |
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| Product | SpoVT/AbrB family protein |
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| Protein accession | YP_002549067 |
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| Protein GI | 222148110 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4456] Virulence-associated protein and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.659289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCAGG AAAGACATGT GCGGGTGTTC AAGAACGGTC GCAATCGCGC CGTCCGCATC
CCCGTGGAAT TCGAGTTTCC GGGCGATGAA GTGATCATGC GCAAGGAAGG CGACCGGATC
ATTATTGAGC CTGTCAACGA CAAGAAGCAA AATCTGATCG AGTGGCTGCG CAGTCAGCCG
CCTATCGAGG AGGATTTTCC CGATTTTGAT CTGATTGAAC CACCGCCGAG ACCAGTCGAT
CTATGA
|
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| Protein sequence | MEQERHVRVF KNGRNRAVRI PVEFEFPGDE VIMRKEGDRI IIEPVNDKKQ NLIEWLRSQP
PIEEDFPDFD LIEPPPRPVD L
|
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