| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1472 |
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| Symbol | |
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| ID | 7386444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1234098 |
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| End bp | 1235984 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650852 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002549057 |
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| Protein GI | 222148100 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.868614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCAGA AAGTCAAAAC GGTTTCGGCC GAGAGCAGTA ATCCGTGGCG CACCATCGTC
AATCTCTGGC CCTATATGTG GCCAGCCGAG CGCCTCGATC TGAAAATGCG GGTGGTCTGG
GCAAGCCTGT TTCTGGTGAT CGCCAAGCTC GTGCTGATGC TGGTGCCCTA TTATTTCAAA
TGGGCCACCG ACGCGCTGAA TGGCAAGATG GATGCGACCG GCCTGCTGCC TGCCTTCATG
CTGTCAGCGG TCATGCTGGT TATTGCCTAT AATCTCGCCC GCATCGTGCA GATGGGCATC
AACCAGTTTC GCGACGCGCT GTTTGCCAGC GTCGGCCAAT ATGCCGTGCG GCGGCTGGCC
CATATAACCT TTCTGCACAT GCATCAATTG TCGCTACGCT TCCATCTGGA GCGCAAGACC
GGCGGGCTGT CGCGGATCAT CGAGCGCGGC ACCAAGGGCA TCGAGACCAT CGTCCGTTTC
ACCATTCTCA ACTCCATCCC GACGCTGATC GAATTTGCCC TGACAGCGGT GATTTTCTGG
TGGGGCTACG GGTTTTCCTA TCTGGCGATC ACCGCCGTCA CCGTCGCCGT CTATGTCTGG
TTCACGGTCA AGGCTTCGGA CTGGCGCATC GCCATTCGCC GCGCCATGAA TGACAGCGAC
ACGGATGCCA ATGTCAAAGC CATCGACTCG CTGTTGAATT TCGAGACGGT CAAATATTTC
GGCAATGAAG ACATGGAGGC CCGCCGCTTC GATGCATCCA TGGCCCGTTA CGAGAAGGCT
GCCACCCAGG TCTGGACCTC TCTCGGCTGG CTGAACTTCG GCCAGGGGCT GATCTTCGGT
GTGGGCATGA CGGTGATGCT GGTGTTTTCG GCACTGGCCG TACAGCGCGG CGAGCAGACC
ATCGGCGATT TCGTCTTCGT CAACGCGCTG CTGTTGCAGC TTTCCGTCCC GCTAAATTTT
ATTGGCATGC TCTACCGTGA AATCCGCCAG GGCCTGACCG ATATCGAACA GATGTTCGAC
CTTCTGGCGG TAGAGCCGGA AGTACGTGAC GCGCCCGATG CCAAACCGCT TGCCATCGCC
AAGGGCGCCA TCACCTTCGA AAACGTGCAT TTCGCCTATG ACCCGGCAAG GCCGATCCTG
AAGGGGATTT CCTTCACCGT GCCGGAGGGC AAGACGGTTG CCGTCGTCGG CCCATCCGGC
GCCGGCAAGT CGACGATTTC GCGGCTGCTC TACAGGTTTT ACGATGTGCA GCAGGGCGCG
ATCCGCATCG ACGGGCAGGA TGTGCGTGAC ATCACGCAGA CCTCGCTGCG CGCTGCCATC
GGCATGGTGC CGCAGGATAC GGTGCTGTTT AACGATACCA TCGCCTATAA TATCCGTTAT
GGCAGGCCTG AGGCCAGCGA CGCCGAGATG GAAGCCGCCG CCGACATTGC CCAGATCAGC
CGCTCGATCC GTGAACTGCC GCAGGGCTAC AAAACCATGG TCGGTGAGCG GGGCCTGAAA
CTGTCGGGCG GCGAAAAACA GCGTGTCGCC ATCGCCCGCA CCGTACTCAA ATCACCGCCA
ATCCTCATTC TCGACGAGGC AACCTCGGCG CTCGACACCA CGACCGAGCA GGATATCCAG
GCGGCCCTCG ACATTGTATC GCAAAATCGC ACCACTTTGG TTATTGCCCA CCGGCTATCG
ACCGTGATCG GTGCCGACGA AATCATCGTT TTGAAAGCAG GCGAAATCGC CGAGCGTGGC
ACCCATGCGG AACTTCTCGC CCAAAACGGC CTTTACGCCT CGATGTGGAA CCGGCAGCGG
GAGGCGACCC AGGCAGAAGA GCATCTGCGC CAGGTGCGCG AAAGCGACGA TCTCGGTGTG
GTCACGCGCC TGCCGCCTGC TGTGTGA
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| Protein sequence | MHQKVKTVSA ESSNPWRTIV NLWPYMWPAE RLDLKMRVVW ASLFLVIAKL VLMLVPYYFK
WATDALNGKM DATGLLPAFM LSAVMLVIAY NLARIVQMGI NQFRDALFAS VGQYAVRRLA
HITFLHMHQL SLRFHLERKT GGLSRIIERG TKGIETIVRF TILNSIPTLI EFALTAVIFW
WGYGFSYLAI TAVTVAVYVW FTVKASDWRI AIRRAMNDSD TDANVKAIDS LLNFETVKYF
GNEDMEARRF DASMARYEKA ATQVWTSLGW LNFGQGLIFG VGMTVMLVFS ALAVQRGEQT
IGDFVFVNAL LLQLSVPLNF IGMLYREIRQ GLTDIEQMFD LLAVEPEVRD APDAKPLAIA
KGAITFENVH FAYDPARPIL KGISFTVPEG KTVAVVGPSG AGKSTISRLL YRFYDVQQGA
IRIDGQDVRD ITQTSLRAAI GMVPQDTVLF NDTIAYNIRY GRPEASDAEM EAAADIAQIS
RSIRELPQGY KTMVGERGLK LSGGEKQRVA IARTVLKSPP ILILDEATSA LDTTTEQDIQ
AALDIVSQNR TTLVIAHRLS TVIGADEIIV LKAGEIAERG THAELLAQNG LYASMWNRQR
EATQAEEHLR QVRESDDLGV VTRLPPAV
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