| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1471 |
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| Symbol | psd |
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| ID | 7386443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1233278 |
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| End bp | 1233976 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650851 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_002549056 |
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| Protein GI | 222148099 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCTTGT TCGATACGAT CCGCAATACC CTCGTCCCCG TGCATAAGGA AGGCTATATT
TTTGTCGGCG CTTTCTTCGT CGGGTCGCTG GTGCTCGGAT GGATCTGGGA GCCGCTGTTC
TGGGTCGGCC TGCTGCTGAC ACTATGGTGC GCCTATTTCT TCCGCGACCC AGAGCGCCTC
ACCCCGCAGG ATGACGATCT GGTGGTCAGC CCTGCCGATG GCCGCGTGTC GATGATCCAG
ATGGTCATCC CGCCGGAAGA ATTGCAGCTG TCGAGCGACC CGATGTTGCG CATCTCGATC
TTCATGAATG TCTTCGATGT CCATATCAAT CGCGCCCCGG TACGCGGCGC AATCCGCCAG
GTTGTCTACC GCGAAGGCAG TTTCCTGAAT GCCGAACTGG ACAAGGCCAG CACCGACAAT
GAGCGCAATT CGCTGGTCAT CGACGGCCCG CGCGGCGCTA TCGGCGTGGT GCAGATCGCA
GGCCTCGTAG CCCGCCGCAT CCTGTGCTGG TCGGTGCCGG GCCAGGCACT CGGCGTGGGC
GAGCGTTTCG GTCTGATCCG CTTCGGTTCG CGACTGGATG TCTACCTCCC AGCCGGCGCC
GAGCCCCGCG TCGCGGTTGG CCAGCGTTCG ATTGGCGGTG AAACCGTGAT CGCGGAATAT
GGTTCGGCAA AGGGCCCGGT CATCAGCCGC CGCAGCTGA
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| Protein sequence | MSLFDTIRNT LVPVHKEGYI FVGAFFVGSL VLGWIWEPLF WVGLLLTLWC AYFFRDPERL
TPQDDDLVVS PADGRVSMIQ MVIPPEELQL SSDPMLRISI FMNVFDVHIN RAPVRGAIRQ
VVYREGSFLN AELDKASTDN ERNSLVIDGP RGAIGVVQIA GLVARRILCW SVPGQALGVG
ERFGLIRFGS RLDVYLPAGA EPRVAVGQRS IGGETVIAEY GSAKGPVISR RS
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