| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1470 |
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| Symbol | pssA |
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| ID | 7386442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1232332 |
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| End bp | 1233240 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650850 |
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| Product | phosphatidylserine synthase |
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| Protein accession | YP_002549055 |
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| Protein GI | 222148098 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1183] Phosphatidylserine synthase |
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| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAGCG ACACGCCGCA GCATCAGGCA CACCCTTCGC AAGAGCATGA GGGACCGAAA
ACTCAGGCGG ATGAGAATCA GCCGGGCCAG CAGGAGGTCA ACGAGGCTTC ACGCGGGCCT
CGGCTGCGGG AAATCCCCCT GCGGTTGATG ATTCCGAACC TGATTACCGT TTTGGCCATA
TGCGCCGGTC TGACCGGCGT CCGCCTGGCC TTCGAAGGAC GTTTCGAGCT TGCGGTCGGC
ATGGTGCTGG TCGCCGCTTT TCTCGATGGC ATCGACGGAC GCATCGCCCG CCTGATGAAA
GCCACATCGA AATTCGGCGC ACAGATGGAC TCGCTTGCCG ATATCGTCAA TTTCGGCGTG
GCGCCCGGTC TGGTTCTGTA TGTCTATATT CTCGACCAGG CCCGGTCCTT CGGCTGGATC
GCTGCGCTGA TCTTTGCGAT ATCAGCAGGC CTGCGGCTTG CCCGCTTCAA CGTGATGGAC
GAGCGCGCCA TCAAGGCCCC TTGGCAAAAC GCCTATTTCG TCGGCGTTCC GGCACCGGCT
GGTGCGCTTC TGGTCATGCT GCCGATCTAT CTCGGCTTTC TGGGTGTGGA AGCCACGCCC
GGATTTGCCT TTGCGTCCTC AGCCTATACG ATGCTGATCG CCTTCCTGCT GATCAGCCGC
TTGCCGGTCT GGTCCGGCAA ATCTGAAAAG AAAGTCCGCC GCGATCTGGT TCTGCCCCTG
ACGATCGCCG TGGTGCTCTA TGTCGCCCTG CTGATGAGCT TCACCTGGGA AGTGCTGTCG
GTGACGGTTA TTGTCTATCT CCTCTCCCTG CCCTTCGGCG CCCGTGCCTG GAAGCGGAAA
TACGGCACCT TGACCGTCAT GGAAGACCAC GACGACCATC ACGGCGCCGG AATGGACCGA
GGCCTTTGA
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| Protein sequence | MTSDTPQHQA HPSQEHEGPK TQADENQPGQ QEVNEASRGP RLREIPLRLM IPNLITVLAI
CAGLTGVRLA FEGRFELAVG MVLVAAFLDG IDGRIARLMK ATSKFGAQMD SLADIVNFGV
APGLVLYVYI LDQARSFGWI AALIFAISAG LRLARFNVMD ERAIKAPWQN AYFVGVPAPA
GALLVMLPIY LGFLGVEATP GFAFASSAYT MLIAFLLISR LPVWSGKSEK KVRRDLVLPL
TIAVVLYVAL LMSFTWEVLS VTVIVYLLSL PFGARAWKRK YGTLTVMEDH DDHHGAGMDR
GL
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