Gene Avi_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1457 
Symbol 
ID7386431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1224910 
End bp1225611 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content58% 
IMG OID643650839 
Producthypothetical protein 
Protein accessionYP_002549044 
Protein GI222148087 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGG GCAATGATAC AGCAGAACCG AGTGATTCCC TCCGAGAAGA TGCCCCGATG 
ATCACCACAG CCTTCGCCCC TCATGACGAT CTTGCCAAAT GGCTCCTGCC GCATGCCACT 
GAGGGCAATG ACGGCTCGCA TGACGCTGCC CATATTTTGC GCGTGTTCAA AAACGCCATG 
CGCATTCACG CGATCGAAGG CGGCGACAGT CAGGTTCTTG CCGCTGCCGT GCTGCTGCAT 
GATTGCGTCT CCATGGAAAA GAACGCACCC AACCGTGCGG ATGCGTCCCG CCTTGCCGCA 
AAGAAAGCTG AAGCAATCCT GGCTGACGAC AGACAATGGC CAGCGAGCAG CATCCAAGCA 
GTCTCCCACG CAATCCTCAC CCATAGTTTT TCGGCCAATC TTGCCCCCGA AACGCTGGAA 
GCAAAAATTC TGCAAGACGC CGACCGGCTG GATGCCATCG GGGTGGTCGG GGCGGCGCGC 
TGTTTCTACA TTGCCGGGCG GCTCGGCTCC GGCCTTTACG ATCCAGCCGA TCCGAAGGCC 
TTACAACGCC CGCTGGACGA CAAGCGCTTT GCCATCGACC ATTTTCAGAC CAAGCTTTTC 
AAGCTGGCGG ATGGCTTCCA GACCCCGACC GGGCAACAGA TGGCGCATGA GCGCCATGCC 
CGCCTCCAGG CAATTTTCAG CGATTTTCTT GAGGAGATCT GA
 
Protein sequence
MDLGNDTAEP SDSLREDAPM ITTAFAPHDD LAKWLLPHAT EGNDGSHDAA HILRVFKNAM 
RIHAIEGGDS QVLAAAVLLH DCVSMEKNAP NRADASRLAA KKAEAILADD RQWPASSIQA 
VSHAILTHSF SANLAPETLE AKILQDADRL DAIGVVGAAR CFYIAGRLGS GLYDPADPKA 
LQRPLDDKRF AIDHFQTKLF KLADGFQTPT GQQMAHERHA RLQAIFSDFL EEI