| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1452 |
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| Symbol | recO |
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| ID | 7386428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1222547 |
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| End bp | 1223341 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650836 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_002549041 |
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| Protein GI | 222148084 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.726701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATGGA CCGATCAGGC AATTGTGTTG GGTGCGCGCA GGCATGGCGA AACCAGCGTC
ATTGCCGAAA TGATGACATT GGCGCGGGGC CGCCATCTCG GTCTGGTGCG GGGCGGGCGA
TCACGCACCA TGCAGCCGGT GTTGCAGCCG GGCAATGTCG TGGAAGTCAC CTGGCGGGCG
CGGCTGGAAG AACATCTGGG CGATTTCCGC GTCGAGCCAT TGCAGTTGCG AGCCGGTCAT
CTGATGAGTT CGGCCACGGC GGTCTATGGC GTGCAGGCGC TTGCGTCTCT GCTGCGGCTG
CTGCCGGAGC GCGAGCCGCA TGGGCATCTG TATGAGGCGA TGAATATTAT TCTCGATCAC
CTGCATGAAC CCGCGTCGGC AGGCGAATTG TTCATCCGCT TTGAACTGGC AATCCTGAAC
GATCTTGGTT TCGGCTTGGA CTTGACAGCC TGCGCAGCCA CCGGTGGGCG TCAAGATCTG
GTTTTCGTCT CGCCGAAAAC GGGAAGAGCG GTTTCCCACG CCGCCGGTCT GCCCTATGCG
GATCGCCTTC TTACTCTTCC GGTTTTCCTG CAACCGGAGC CATTAGTCGG TAAAGACAAA
CAGGCGGATG CGCAGGCCCT GCAACAGGCC TTCCGGCTGA CCGGTTATTT TCTACAAAGA
CATGTGTATG AACCGCGCGG GCTCACGGCT GGAGCCGCGC GCGATGGTTT CTGTCAGGCG
GCGCTGAAAG CCTTGGAGAC GCCGGATGAG ATTGCGCTCG GTGGAGCTGC CCCGAAACCG
GTGAGGGTGC CATAG
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| Protein sequence | MEWTDQAIVL GARRHGETSV IAEMMTLARG RHLGLVRGGR SRTMQPVLQP GNVVEVTWRA
RLEEHLGDFR VEPLQLRAGH LMSSATAVYG VQALASLLRL LPEREPHGHL YEAMNIILDH
LHEPASAGEL FIRFELAILN DLGFGLDLTA CAATGGRQDL VFVSPKTGRA VSHAAGLPYA
DRLLTLPVFL QPEPLVGKDK QADAQALQQA FRLTGYFLQR HVYEPRGLTA GAARDGFCQA
ALKALETPDE IALGGAAPKP VRVP
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