| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1450 |
|---|
| Symbol | era |
|---|
| ID | 7386426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1220204 |
|---|
| End bp | 1221187 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643650834 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_002549039 |
|---|
| Protein GI | 222148082 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.176106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC ATGAAAACCA ACCGACTGGC GATGGCCAGA TCGCAGACAC CGTCGCTGGC
ACCGTGGCTG AAGATGCGGC TGTGGTTCGG CCGACCCATT CTGGCTTCGT TGCCTTGATC
GGTCCCACCA ATGCCGGCAA GTCGACCCTG GTGAACCGGT TTGTTGGTGC CAAGGTGTCG
ATCGTCAGCC ACAAAGTGCA GACGACGCGC GCCGTCATGC GCGGCATTGC GATCCATAAC
AATGCACAGA TCGTCTTCAT GGACACGCCC GGCATTTTCA AGCCACGCCG CAAGCTGGAC
CGCGCCATGG TGACATCCGC CTGGGGCGGG GCCAAGGATG CTGACGTGAT CCTGTTGCTG
ATCGACAGTG AACGCGGATT GCGCGGCGAT GGCGAAGCCA TTCTGGAAGC ATTGAAAGAT
GTGCATCAGC CGAAAATCCT CGTGCTGAAC AAAATCGACC AGGTGCGTCA CGAGGATCTG
CTGAAACTGG CCTCGACGGC CAACGAGGCA GTGAAGTTCG AGCGCACCTT CATGATCTCC
GCCACCAACG GTTCCGGCTG CCAGGACGTG ATGGATTATC TGGCCGATTA CCTGCCCGAA
GGCCCCTGGT ATTATCCTGA GGATCAGATT TCCGACCTGC CGATGCGTCA ACTGGCGGCG
GAAATCACCC GCGAAAAACT CTTCCTGCGC CTGCATCAGG AATTGCCCTA TTCTTCTCAT
GTCGAAACCG AGAAATGGGA AGAACGCAAG GATGGCTCGG TCAGGATCGA GCAGGTGATC
TATGTCGAGC GCGACAGCCA GAAGAAGATC GTGCTTGGCA AGAATGGCGA TGCCATCAAG
TCGATCTCCA CCAGTTCGCG CAAGGAAATG TCGGAAATTC TCGAACAGAC GGTTCACCTG
TTCCTATTCG TGAAAGTCCG TGAAAACTGG GGCAACGATC CCGAACGATT CCGCGAAATG
GGCCTGGAAT TTCCGAGGGA CTAA
|
|---|
| Protein sequence | MTEHENQPTG DGQIADTVAG TVAEDAAVVR PTHSGFVALI GPTNAGKSTL VNRFVGAKVS
IVSHKVQTTR AVMRGIAIHN NAQIVFMDTP GIFKPRRKLD RAMVTSAWGG AKDADVILLL
IDSERGLRGD GEAILEALKD VHQPKILVLN KIDQVRHEDL LKLASTANEA VKFERTFMIS
ATNGSGCQDV MDYLADYLPE GPWYYPEDQI SDLPMRQLAA EITREKLFLR LHQELPYSSH
VETEKWEERK DGSVRIEQVI YVERDSQKKI VLGKNGDAIK SISTSSRKEM SEILEQTVHL
FLFVKVRENW GNDPERFREM GLEFPRD
|
|---|
| |