Gene Avi_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1440 
Symbol 
ID7386420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1214057 
End bp1214635 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content53% 
IMG OID643650828 
Producthypothetical protein 
Protein accessionYP_002549033 
Protein GI222148076 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATC CGAGAGAAAA AATAGCGCTT TTCATAGATG GCGCAAATTT ATATGCGGCT 
TCCAAAAGCC TTGGTTTCGA TATCGATTAC CGCAAGCTGC TCAAAGCATT TCAGAAGCGT 
GGCTATCTGC TGCGCGCTTA CTATTACACC GCGTTGATCG AAGACCAGGA ATATTCGTCG 
ATCCGTCCGC TGATCGATTG GCTGGACTAT AACGGCTACA AGGTCATTAC CAAGCCGGCC 
AAGGAATTCA CCGATTCCAT GGGCCGCCGC AAGGTCAAGG GCAACATGGA TATCGAACTG 
GCCATTGATG CGATGGAACA GTCCGAAACT GTGGATCATC TGGTGATCTT CTCCGGCGAC 
GGCGATTTTA CCACGCTGGT CGAAGCCCTT CAGCGCAAGG GCCGCAAGGT TTCCGTGGTT 
TCGACTATGT CGACCCAGCC GCCGATGATT GCCGACGACC TTCGCCGCCA GGCAGATCAT 
TTCATCGATC TCGTATCGTT GAAGGCTGAA ATCGGTCGCG ATCCAAGCGA ACGGCCGATG 
CGCCAGGTCG AACCCATGCT AGCAGAGCCG CAGATCTGA
 
Protein sequence
MFDPREKIAL FIDGANLYAA SKSLGFDIDY RKLLKAFQKR GYLLRAYYYT ALIEDQEYSS 
IRPLIDWLDY NGYKVITKPA KEFTDSMGRR KVKGNMDIEL AIDAMEQSET VDHLVIFSGD 
GDFTTLVEAL QRKGRKVSVV STMSTQPPMI ADDLRRQADH FIDLVSLKAE IGRDPSERPM 
RQVEPMLAEP QI