Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1426 |
Symbol | |
ID | 7386828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1200503 |
End bp | 1201720 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650818 |
Product | ferredoxin reductase |
Protein accession | YP_002549024 |
Protein GI | 222148067 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.464623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAAATT CATTGGTGAT TGTCGGCGCA GGGCAGGCCG GTTTTTCTGT TGCGTCAAAA CTACGGGCAC TGAACGACCA ACGACCGATT ACCATGATTT GCCTTGCGCC GGAATTACCC TATCAGCGCC CACCGCTTTC AAAAAAATAT CTGATCGGTG AAATGAGTTT TGATCGACTG CTGTTGCGGC CCGCCCAATG GTACGATGAA AACGCGATCA CAATGCGCCT TTCCAGTTGG GTGGAGGAAA TTGATCGACC GAAAAAGCTG CTTCGGCTTC AGGACGGTTC ATCACTTTCC TATGACACGC TCGTGCTTGC CACCGGTTCG ACGCCGCGCG GATTGCCGCA GGAAATTGGC GGCAATCTGG CTGGTGTCTA CACGATCCGC AACAAGGCCG ATGCTGACCG CCTGGCTGAG GTGATGAAAC CAGGGCGGCG GCTGTTGATC ATAGGGGGCG GCTATATTGG CCTGGAGGCT GCTGCCGTGG CGCGCCATCT CGGCCTTGAG GTCACTGTGA TCGAAATGGC CGACCGCATT CTTGCGCGTG TTGCTGCAAA GGAGACTGCC GATTTCATAC GTGCCGTTCA CCAGGGCCAT GGCGTGATGA TTCGCGAAAA CATGGGCTTG AAACGCCTGC TGGGTAAGAA TGATATCGTG ACCGCAGCCG AGCTTTCAGA TGGCAGCAGG CTTGATGTCG ATCTGGTGAT CGTCGGTATC GGCGCTACCG CCAATGACGG ATTGGCACGC AACGCCGGAC TGAATGTACA GAATGGCATT ATTGTCGACA GCTATGCCCG GACATCCGAT CCTAACATAT TCGCCGCAGG CGATTGCGCG CTGCTTCCTT GGGGTGAGGG GGCTGTCCGG CTGGAATCAG TTCAGAATGC CGTCGATCAA GGGGAAGCCA TCGCCATGGT ACTCGCAGGT GGGACAACGC CCTACACGCC AAAACCATGG TTCTGGTCGG ATCAATACGA TCTGAAACTG CAAATCGCCG GGCTTAACTT GGGCTATGAC GAGACGATTA TAAGACCGGG CATGCGCGAG GGTAGCCTGT CCGTCTGGTA TTATCGCCAG GACCGTTTCC TTGCGGTCGA TGCCATCAAT GATGCCAAGG CCTATGTCAC GGCCAAAAAG CTTCTGGAAG CCGGCGGGTC CGCCGATAAG GCAATCATTG GTAATCCGCA GGAAGATTTA AAGCAGTTGC TGGCCTGA
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Protein sequence | MENSLVIVGA GQAGFSVASK LRALNDQRPI TMICLAPELP YQRPPLSKKY LIGEMSFDRL LLRPAQWYDE NAITMRLSSW VEEIDRPKKL LRLQDGSSLS YDTLVLATGS TPRGLPQEIG GNLAGVYTIR NKADADRLAE VMKPGRRLLI IGGGYIGLEA AAVARHLGLE VTVIEMADRI LARVAAKETA DFIRAVHQGH GVMIRENMGL KRLLGKNDIV TAAELSDGSR LDVDLVIVGI GATANDGLAR NAGLNVQNGI IVDSYARTSD PNIFAAGDCA LLPWGEGAVR LESVQNAVDQ GEAIAMVLAG GTTPYTPKPW FWSDQYDLKL QIAGLNLGYD ETIIRPGMRE GSLSVWYYRQ DRFLAVDAIN DAKAYVTAKK LLEAGGSADK AIIGNPQEDL KQLLA
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