| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1404 |
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| Symbol | |
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| ID | 7389131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1183698 |
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| End bp | 1184621 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650802 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002549008 |
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| Protein GI | 222148051 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.756785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAATT TCGTCCTGCG CCGACTGATG AGCGCCGTGC CAACGGTGTT CGTCGTCATC
ACCATATCCT TCTTCCTGAT GCGCTTTGCG CCGGGCGGGC CGTTCGACCT CGAGCGCCCG
TTGCCGCCTG ATATCATGGC CAACCTGATG AAGACCTATC AGTTGGACCA GCCGATCTGG
CAGCAATATA TCACCTATCT CGGCAATGCC CTGCGCGGTG ATTTCGGTCC AAGTTTCATC
TACAAAGACA ATACCGTTGC CCAGTTGATT GCCCAGGCCC TGCCCTATTC GGTTCAGCTT
GGTGCTACCG CCCTGCTGAT CGCGCTGATC GGCGGCGTCA TCCTCGGGAC TATCGCCGCG
TTGCGTCAGA ATGGCCTGAT CGATTTCGTC GTGATGACCT TCGCGACAGT GGGCGTCACA
ATTCCGAATT TCGTCATGGG ACCAGTGCTG ACGCTGATTT TTGCCCTGAT GCTATCCCTT
CTACCTGCGG GCGGATGGGG TGACGGCTCG CCCTATTATC TCGCCCTGCC GATCACCGTT
CTGGCCCTGC CGCAAATCGC CATCATCGCG CGGCTGACGC GCGGCTCGAT GATCGAGGCA
CTGCATACAG ACCATATCCG CACGGCCCGC GCCTATGGCC TGCCGTCGCG CACCATCGTC
ATCACCCATG CCTTGCGTGG CGCCATGCTG CCGGTCGTGT CCTATCTAGC GCCCGCAGCA
GCCGCCCTCC TGACCGGCTC GGCTGTGGTC GAAAGCATTT TCACCATTCC GGGCGTCGGC
CGCTTCTTCG TCATCGGTGC GCTGAACCGG GACTATCCCT TGGTCATGGC CACCGTGGTT
CTCGTTGCGG TATTCGTGAT CGTTTTCAAC CTGATCGTCG ACATCGCCTA CGGCCTGCTC
GACCCGAGGG TTCGCCATGA CTGA
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| Protein sequence | MINFVLRRLM SAVPTVFVVI TISFFLMRFA PGGPFDLERP LPPDIMANLM KTYQLDQPIW
QQYITYLGNA LRGDFGPSFI YKDNTVAQLI AQALPYSVQL GATALLIALI GGVILGTIAA
LRQNGLIDFV VMTFATVGVT IPNFVMGPVL TLIFALMLSL LPAGGWGDGS PYYLALPITV
LALPQIAIIA RLTRGSMIEA LHTDHIRTAR AYGLPSRTIV ITHALRGAML PVVSYLAPAA
AALLTGSAVV ESIFTIPGVG RFFVIGALNR DYPLVMATVV LVAVFVIVFN LIVDIAYGLL
DPRVRHD
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